Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cd74P04441 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd74P04441 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd74P04441 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd74P04441 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd74P04441 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.67■□□□□ 0.26
Cd74P04441 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd74P04441 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd74P04441 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cd74P04441 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd74P04441 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Cd74P04441 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd74P04441 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.67■□□□□ 0.26
Cd74P04441 Gm21956-201ENSMUST00000179946 522 ntBASIC16.67■□□□□ 0.26
Cd74P04441 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.67■□□□□ 0.26
Cd74P04441 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.67■□□□□ 0.26
Cd74P04441 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cd74P04441 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd74P04441 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.67■□□□□ 0.26
Cd74P04441 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd74P04441 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.67■□□□□ 0.26
Cd74P04441 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd74P04441 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd74P04441 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd74P04441 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cd74P04441 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd74P04441 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd74P04441 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd74P04441 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd74P04441 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cd74P04441 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cd74P04441 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd74P04441 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd74P04441 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd74P04441 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd74P04441 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd74P04441 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd74P04441 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd74P04441 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd74P04441 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cd74P04441 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cd74P04441 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd74P04441 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd74P04441 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd74P04441 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.64■□□□□ 0.25
Cd74P04441 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd74P04441 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cd74P04441 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Cd74P04441 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.64■□□□□ 0.25
Cd74P04441 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cd74P04441 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.63■□□□□ 0.25
Cd74P04441 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.63■□□□□ 0.25
Cd74P04441 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd74P04441 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd74P04441 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd74P04441 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cd74P04441 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd74P04441 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cd74P04441 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd74P04441 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd74P04441 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd74P04441 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Cd74P04441 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cd74P04441 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd74P04441 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cd74P04441 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd74P04441 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cd74P04441 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cd74P04441 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd74P04441 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd74P04441 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd74P04441 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cd74P04441 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd74P04441 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cd74P04441 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd74P04441 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cd74P04441 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cd74P04441 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd74P04441 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cd74P04441 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cd74P04441 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd74P04441 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd74P04441 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd74P04441 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd74P04441 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd74P04441 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd74P04441 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cd74P04441 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cd74P04441 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Cd74P04441 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cd74P04441 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd74P04441 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd74P04441 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd74P04441 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd74P04441 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd74P04441 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cd74P04441 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cd74P04441 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cd74P04441 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cd74P04441 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms