Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hps1O08983 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hps1O08983 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hps1O08983 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hps1O08983 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hps1O08983 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hps1O08983 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hps1O08983 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hps1O08983 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hps1O08983 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hps1O08983 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
Hps1O08983 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.38■□□□□ 0.53
Hps1O08983 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hps1O08983 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hps1O08983 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.38■□□□□ 0.53
Hps1O08983 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hps1O08983 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hps1O08983 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Hps1O08983 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Hps1O08983 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Hps1O08983 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hps1O08983 Golph3-202ENSMUST00000226517 2359 ntBASIC18.38■□□□□ 0.53
Hps1O08983 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Hps1O08983 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hps1O08983 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hps1O08983 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hps1O08983 Gm9847-201ENSMUST00000052528 599 ntBASIC18.37■□□□□ 0.53
Hps1O08983 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hps1O08983 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hps1O08983 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.37■□□□□ 0.53
Hps1O08983 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hps1O08983 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hps1O08983 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hps1O08983 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hps1O08983 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hps1O08983 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hps1O08983 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hps1O08983 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hps1O08983 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Hps1O08983 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hps1O08983 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.36■□□□□ 0.53
Hps1O08983 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hps1O08983 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hps1O08983 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hps1O08983 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hps1O08983 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hps1O08983 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hps1O08983 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hps1O08983 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hps1O08983 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hps1O08983 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hps1O08983 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Hps1O08983 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hps1O08983 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.35■□□□□ 0.53
Hps1O08983 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.35■□□□□ 0.53
Hps1O08983 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Hps1O08983 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hps1O08983 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hps1O08983 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hps1O08983 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hps1O08983 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hps1O08983 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hps1O08983 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hps1O08983 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hps1O08983 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hps1O08983 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.33■□□□□ 0.53
Hps1O08983 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hps1O08983 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.33■□□□□ 0.53
Hps1O08983 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hps1O08983 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hps1O08983 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hps1O08983 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hps1O08983 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hps1O08983 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.33■□□□□ 0.52
Hps1O08983 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hps1O08983 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hps1O08983 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hps1O08983 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hps1O08983 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hps1O08983 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hps1O08983 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Hps1O08983 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hps1O08983 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.32■□□□□ 0.52
Hps1O08983 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.32■□□□□ 0.52
Hps1O08983 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hps1O08983 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hps1O08983 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hps1O08983 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hps1O08983 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Hps1O08983 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.31■□□□□ 0.52
Hps1O08983 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Hps1O08983 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hps1O08983 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hps1O08983 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hps1O08983 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hps1O08983 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Hps1O08983 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hps1O08983 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Hps1O08983 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Hps1O08983 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms