Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Gm42778-201ENSMUST00000199644 553 ntBASIC21.13■□□□□ 0.97
Gm11236J3QMS7 AV356131-201ENSMUST00000206201 750 ntBASIC21.13■□□□□ 0.97
Gm11236J3QMS7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm11236J3QMS7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm11236J3QMS7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.13■□□□□ 0.97
Gm11236J3QMS7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm11236J3QMS7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm11236J3QMS7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm11236J3QMS7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.12■□□□□ 0.97
Gm11236J3QMS7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.12■□□□□ 0.97
Gm11236J3QMS7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm11236J3QMS7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.12■□□□□ 0.97
Gm11236J3QMS7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.12■□□□□ 0.97
Gm11236J3QMS7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm11236J3QMS7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm11236J3QMS7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm11236J3QMS7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm11236J3QMS7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm11236J3QMS7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm11236J3QMS7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm11236J3QMS7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm11236J3QMS7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm11236J3QMS7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Gm11236J3QMS7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Gm11236J3QMS7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm11236J3QMS7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Gm11236J3QMS7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm11236J3QMS7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm11236J3QMS7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm11236J3QMS7 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.09■□□□□ 0.97
Gm11236J3QMS7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm11236J3QMS7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gm11236J3QMS7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm11236J3QMS7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11236J3QMS7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11236J3QMS7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11236J3QMS7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11236J3QMS7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11236J3QMS7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11236J3QMS7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11236J3QMS7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11236J3QMS7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11236J3QMS7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Gm11236J3QMS7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm11236J3QMS7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm11236J3QMS7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm11236J3QMS7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.07■□□□□ 0.96
Gm11236J3QMS7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm11236J3QMS7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm11236J3QMS7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm11236J3QMS7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm11236J3QMS7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm11236J3QMS7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm11236J3QMS7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm11236J3QMS7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.07■□□□□ 0.96
Gm11236J3QMS7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm11236J3QMS7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm11236J3QMS7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Gm11236J3QMS7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.06■□□□□ 0.96
Gm11236J3QMS7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm11236J3QMS7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm11236J3QMS7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm11236J3QMS7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
Gm11236J3QMS7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm11236J3QMS7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm11236J3QMS7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm11236J3QMS7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.05■□□□□ 0.96
Gm11236J3QMS7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm11236J3QMS7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.05■□□□□ 0.96
Gm11236J3QMS7 Gm27801-201ENSMUST00000184174 223 ntBASIC21.05■□□□□ 0.96
Gm11236J3QMS7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm11236J3QMS7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm11236J3QMS7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm11236J3QMS7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm11236J3QMS7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11236J3QMS7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11236J3QMS7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Gm11236J3QMS7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11236J3QMS7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11236J3QMS7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11236J3QMS7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.04■□□□□ 0.96
Gm11236J3QMS7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11236J3QMS7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11236J3QMS7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11236J3QMS7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11236J3QMS7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm11236J3QMS7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Gm11236J3QMS7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm11236J3QMS7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.03■□□□□ 0.96
Gm11236J3QMS7 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.03■□□□□ 0.96
Gm11236J3QMS7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm11236J3QMS7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Gm11236J3QMS7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Gm11236J3QMS7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.02■□□□□ 0.96
Gm11236J3QMS7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Gm11236J3QMS7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11236J3QMS7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.02■□□□□ 0.96
Gm11236J3QMS7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11236J3QMS7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Gm11236J3QMS7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms