Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Herc1E9PZP8 Gm43530-201ENSMUST00000195920 274 ntBASIC11.62□□□□□ -0.55
Herc1E9PZP8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc1E9PZP8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Herc1E9PZP8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc1E9PZP8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.62□□□□□ -0.55
Herc1E9PZP8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc1E9PZP8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC11.62□□□□□ -0.55
Herc1E9PZP8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Herc1E9PZP8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Herc1E9PZP8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC11.61□□□□□ -0.55
Herc1E9PZP8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Herc1E9PZP8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC11.61□□□□□ -0.55
Herc1E9PZP8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.61□□□□□ -0.55
Herc1E9PZP8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Herc1E9PZP8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Herc1E9PZP8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Herc1E9PZP8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Herc1E9PZP8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Herc1E9PZP8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Herc1E9PZP8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Herc1E9PZP8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Herc1E9PZP8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.6□□□□□ -0.55
Herc1E9PZP8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Herc1E9PZP8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Herc1E9PZP8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC11.6□□□□□ -0.55
Herc1E9PZP8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Herc1E9PZP8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Herc1E9PZP8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Herc1E9PZP8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Herc1E9PZP8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Herc1E9PZP8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Herc1E9PZP8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Herc1E9PZP8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC11.6□□□□□ -0.55
Herc1E9PZP8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Herc1E9PZP8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.6□□□□□ -0.55
Herc1E9PZP8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Herc1E9PZP8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Herc1E9PZP8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Herc1E9PZP8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Herc1E9PZP8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Herc1E9PZP8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Herc1E9PZP8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Herc1E9PZP8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC11.59□□□□□ -0.55
Herc1E9PZP8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Herc1E9PZP8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC11.59□□□□□ -0.55
Herc1E9PZP8 Gm9103-201ENSMUST00000119371 405 ntBASIC11.59□□□□□ -0.55
Herc1E9PZP8 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Herc1E9PZP8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Herc1E9PZP8 Ank2-226ENSMUST00000189368 339 ntBASIC11.58□□□□□ -0.56
Herc1E9PZP8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC11.58□□□□□ -0.56
Herc1E9PZP8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Herc1E9PZP8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Herc1E9PZP8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Herc1E9PZP8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Herc1E9PZP8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Herc1E9PZP8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Herc1E9PZP8 Zxda-201ENSMUST00000117281 2621 ntBASIC11.58□□□□□ -0.56
Herc1E9PZP8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Gm44771-201ENSMUST00000206975 626 ntBASIC11.57□□□□□ -0.56
Herc1E9PZP8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.57□□□□□ -0.56
Herc1E9PZP8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Gm13146-201ENSMUST00000118508 780 ntBASIC11.57□□□□□ -0.56
Herc1E9PZP8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Alkbh1-212ENSMUST00000185301 408 ntBASIC11.57□□□□□ -0.56
Herc1E9PZP8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Herc1E9PZP8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Herc1E9PZP8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Herc1E9PZP8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Herc1E9PZP8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Herc1E9PZP8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Herc1E9PZP8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Herc1E9PZP8 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Herc1E9PZP8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Herc1E9PZP8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Herc1E9PZP8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Herc1E9PZP8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Herc1E9PZP8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Herc1E9PZP8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Herc1E9PZP8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Herc1E9PZP8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Herc1E9PZP8 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC11.55□□□□□ -0.56
Herc1E9PZP8 Gm12896-201ENSMUST00000118430 226 ntBASIC11.55□□□□□ -0.56
Herc1E9PZP8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Herc1E9PZP8 Mir1199-201ENSMUST00000117015 119 ntBASIC11.55□□□□□ -0.56
Herc1E9PZP8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms