Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav8n-2A0A075B633 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.44■□□□□ 0.54
Trav8n-2A0A075B633 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav8n-2A0A075B633 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav8n-2A0A075B633 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav8n-2A0A075B633 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav8n-2A0A075B633 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trav8n-2A0A075B633 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav8n-2A0A075B633 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav8n-2A0A075B633 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trav8n-2A0A075B633 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trav8n-2A0A075B633 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav8n-2A0A075B633 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav8n-2A0A075B633 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.43■□□□□ 0.54
Trav8n-2A0A075B633 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav8n-2A0A075B633 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav8n-2A0A075B633 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav8n-2A0A075B633 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav8n-2A0A075B633 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav8n-2A0A075B633 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav8n-2A0A075B633 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav8n-2A0A075B633 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav8n-2A0A075B633 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.42■□□□□ 0.54
Trav8n-2A0A075B633 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav8n-2A0A075B633 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav8n-2A0A075B633 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav8n-2A0A075B633 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav8n-2A0A075B633 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.42■□□□□ 0.54
Trav8n-2A0A075B633 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trav8n-2A0A075B633 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav8n-2A0A075B633 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav8n-2A0A075B633 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav8n-2A0A075B633 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav8n-2A0A075B633 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav8n-2A0A075B633 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav8n-2A0A075B633 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.41■□□□□ 0.54
Trav8n-2A0A075B633 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav8n-2A0A075B633 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.41■□□□□ 0.54
Trav8n-2A0A075B633 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav8n-2A0A075B633 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trav8n-2A0A075B633 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Trav8n-2A0A075B633 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trav8n-2A0A075B633 Gm12933-201ENSMUST00000120203 872 ntBASIC18.4■□□□□ 0.54
Trav8n-2A0A075B633 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trav8n-2A0A075B633 Gm27011-201ENSMUST00000182352 972 ntBASIC18.4■□□□□ 0.54
Trav8n-2A0A075B633 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.4■□□□□ 0.54
Trav8n-2A0A075B633 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav8n-2A0A075B633 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav8n-2A0A075B633 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav8n-2A0A075B633 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav8n-2A0A075B633 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav8n-2A0A075B633 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav8n-2A0A075B633 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Trav8n-2A0A075B633 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav8n-2A0A075B633 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav8n-2A0A075B633 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav8n-2A0A075B633 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trav8n-2A0A075B633 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.39■□□□□ 0.53
Trav8n-2A0A075B633 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav8n-2A0A075B633 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav8n-2A0A075B633 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Trav8n-2A0A075B633 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trav8n-2A0A075B633 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav8n-2A0A075B633 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8n-2A0A075B633 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8n-2A0A075B633 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8n-2A0A075B633 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8n-2A0A075B633 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8n-2A0A075B633 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.38■□□□□ 0.53
Trav8n-2A0A075B633 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.38■□□□□ 0.53
Trav8n-2A0A075B633 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8n-2A0A075B633 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8n-2A0A075B633 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8n-2A0A075B633 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trav8n-2A0A075B633 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav8n-2A0A075B633 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav8n-2A0A075B633 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav8n-2A0A075B633 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.37■□□□□ 0.53
Trav8n-2A0A075B633 Gm13234-201ENSMUST00000120010 747 ntBASIC18.37■□□□□ 0.53
Trav8n-2A0A075B633 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Trav8n-2A0A075B633 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav8n-2A0A075B633 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trav8n-2A0A075B633 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trav8n-2A0A075B633 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Trav8n-2A0A075B633 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav8n-2A0A075B633 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav8n-2A0A075B633 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav8n-2A0A075B633 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.36■□□□□ 0.53
Trav8n-2A0A075B633 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trav8n-2A0A075B633 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.36■□□□□ 0.53
Trav8n-2A0A075B633 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.36■□□□□ 0.53
Trav8n-2A0A075B633 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trav8n-2A0A075B633 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav8n-2A0A075B633 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trav8n-2A0A075B633 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav8n-2A0A075B633 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav8n-2A0A075B633 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav8n-2A0A075B633 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav8n-2A0A075B633 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav8n-2A0A075B633 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms