Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav6n-5A0A075B621 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.49■□□□□ 0.07
Trav6n-5A0A075B621 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-5A0A075B621 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-5A0A075B621 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-5A0A075B621 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-5A0A075B621 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav6n-5A0A075B621 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-5A0A075B621 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6n-5A0A075B621 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-5A0A075B621 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav6n-5A0A075B621 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Trav6n-5A0A075B621 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-5A0A075B621 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav6n-5A0A075B621 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-5A0A075B621 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-5A0A075B621 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-5A0A075B621 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-5A0A075B621 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Trav6n-5A0A075B621 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6n-5A0A075B621 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.48■□□□□ 0.07
Trav6n-5A0A075B621 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-5A0A075B621 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-5A0A075B621 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-5A0A075B621 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-5A0A075B621 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-5A0A075B621 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-5A0A075B621 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-5A0A075B621 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.47■□□□□ 0.07
Trav6n-5A0A075B621 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-5A0A075B621 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-5A0A075B621 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-5A0A075B621 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-5A0A075B621 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
Trav6n-5A0A075B621 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-5A0A075B621 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-5A0A075B621 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6n-5A0A075B621 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Trav6n-5A0A075B621 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav6n-5A0A075B621 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6n-5A0A075B621 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6n-5A0A075B621 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6n-5A0A075B621 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6n-5A0A075B621 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6n-5A0A075B621 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav6n-5A0A075B621 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6n-5A0A075B621 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav6n-5A0A075B621 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6n-5A0A075B621 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.45■□□□□ 0.06
Trav6n-5A0A075B621 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-5A0A075B621 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-5A0A075B621 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-5A0A075B621 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-5A0A075B621 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-5A0A075B621 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-5A0A075B621 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-5A0A075B621 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-5A0A075B621 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav6n-5A0A075B621 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-5A0A075B621 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-5A0A075B621 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-5A0A075B621 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6n-5A0A075B621 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav6n-5A0A075B621 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-5A0A075B621 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-5A0A075B621 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-5A0A075B621 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav6n-5A0A075B621 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav6n-5A0A075B621 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-5A0A075B621 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-5A0A075B621 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6n-5A0A075B621 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav6n-5A0A075B621 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-5A0A075B621 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav6n-5A0A075B621 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-5A0A075B621 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav6n-5A0A075B621 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trav6n-5A0A075B621 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-5A0A075B621 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-5A0A075B621 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-5A0A075B621 Golph3-205ENSMUST00000228671 2842 ntBASIC15.43■□□□□ 0.06
Trav6n-5A0A075B621 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-5A0A075B621 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav6n-5A0A075B621 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-5A0A075B621 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-5A0A075B621 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6n-5A0A075B621 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6n-5A0A075B621 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms