Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-1A0A075B5Z8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-1A0A075B5Z8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-1A0A075B5Z8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-1A0A075B5Z8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-1A0A075B5Z8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-1A0A075B5Z8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-1A0A075B5Z8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-1A0A075B5Z8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-1A0A075B5Z8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-1A0A075B5Z8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-1A0A075B5Z8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-1A0A075B5Z8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-1A0A075B5Z8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-1A0A075B5Z8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-1A0A075B5Z8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6-1A0A075B5Z8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6-1A0A075B5Z8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6-1A0A075B5Z8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
Trav6-1A0A075B5Z8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-1A0A075B5Z8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Trav6-1A0A075B5Z8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-1A0A075B5Z8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-1A0A075B5Z8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-1A0A075B5Z8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-1A0A075B5Z8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.08■□□□□ 0.16
Trav6-1A0A075B5Z8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-1A0A075B5Z8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-1A0A075B5Z8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-1A0A075B5Z8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-1A0A075B5Z8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-1A0A075B5Z8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav6-1A0A075B5Z8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-1A0A075B5Z8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-1A0A075B5Z8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
Trav6-1A0A075B5Z8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-1A0A075B5Z8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-1A0A075B5Z8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-1A0A075B5Z8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-1A0A075B5Z8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Trav6-1A0A075B5Z8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-1A0A075B5Z8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-1A0A075B5Z8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-1A0A075B5Z8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Trav6-1A0A075B5Z8 Mir6538-201ENSMUST00000183713 110 ntBASIC16.06■□□□□ 0.16
Trav6-1A0A075B5Z8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav6-1A0A075B5Z8 Gm45444-201ENSMUST00000211394 898 ntBASIC16.06■□□□□ 0.16
Trav6-1A0A075B5Z8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-1A0A075B5Z8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-1A0A075B5Z8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-1A0A075B5Z8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-1A0A075B5Z8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-1A0A075B5Z8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-1A0A075B5Z8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-1A0A075B5Z8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-1A0A075B5Z8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.05■□□□□ 0.16
Trav6-1A0A075B5Z8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-1A0A075B5Z8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav6-1A0A075B5Z8 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.05■□□□□ 0.16
Trav6-1A0A075B5Z8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-1A0A075B5Z8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-1A0A075B5Z8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav6-1A0A075B5Z8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-1A0A075B5Z8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-1A0A075B5Z8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-1A0A075B5Z8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-1A0A075B5Z8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-1A0A075B5Z8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-1A0A075B5Z8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-1A0A075B5Z8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.04■□□□□ 0.16
Trav6-1A0A075B5Z8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-1A0A075B5Z8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-1A0A075B5Z8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-1A0A075B5Z8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-1A0A075B5Z8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-1A0A075B5Z8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav6-1A0A075B5Z8 Gm10399-202ENSMUST00000202768 748 ntBASIC16.04■□□□□ 0.16
Trav6-1A0A075B5Z8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
Trav6-1A0A075B5Z8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-1A0A075B5Z8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-1A0A075B5Z8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-1A0A075B5Z8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-1A0A075B5Z8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-1A0A075B5Z8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms