Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CcsQ9WU84 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CcsQ9WU84 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CcsQ9WU84 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CcsQ9WU84 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CcsQ9WU84 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.73■□□□□ 0.75
CcsQ9WU84 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CcsQ9WU84 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CcsQ9WU84 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CcsQ9WU84 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CcsQ9WU84 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.68■□□□□ 0.74
CcsQ9WU84 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CcsQ9WU84 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CcsQ9WU84 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CcsQ9WU84 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CcsQ9WU84 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CcsQ9WU84 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CcsQ9WU84 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CcsQ9WU84 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CcsQ9WU84 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CcsQ9WU84 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CcsQ9WU84 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CcsQ9WU84 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.59■□□□□ 0.73
CcsQ9WU84 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CcsQ9WU84 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CcsQ9WU84 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CcsQ9WU84 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CcsQ9WU84 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CcsQ9WU84 Gm26115-201ENSMUST00000175605 87 ntBASIC19.56■□□□□ 0.72
CcsQ9WU84 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.56■□□□□ 0.72
CcsQ9WU84 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.55■□□□□ 0.72
CcsQ9WU84 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CcsQ9WU84 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
CcsQ9WU84 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CcsQ9WU84 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CcsQ9WU84 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CcsQ9WU84 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.53■□□□□ 0.72
CcsQ9WU84 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CcsQ9WU84 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CcsQ9WU84 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CcsQ9WU84 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CcsQ9WU84 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CcsQ9WU84 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CcsQ9WU84 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CcsQ9WU84 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CcsQ9WU84 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CcsQ9WU84 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CcsQ9WU84 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CcsQ9WU84 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CcsQ9WU84 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CcsQ9WU84 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CcsQ9WU84 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CcsQ9WU84 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CcsQ9WU84 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CcsQ9WU84 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CcsQ9WU84 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CcsQ9WU84 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CcsQ9WU84 Gm8109-201ENSMUST00000194076 746 ntBASIC19.43■□□□□ 0.7
CcsQ9WU84 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CcsQ9WU84 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CcsQ9WU84 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CcsQ9WU84 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CcsQ9WU84 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CcsQ9WU84 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CcsQ9WU84 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.38■□□□□ 0.69
CcsQ9WU84 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CcsQ9WU84 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CcsQ9WU84 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.35■□□□□ 0.69
CcsQ9WU84 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CcsQ9WU84 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CcsQ9WU84 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CcsQ9WU84 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CcsQ9WU84 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CcsQ9WU84 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CcsQ9WU84 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CcsQ9WU84 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CcsQ9WU84 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.31■□□□□ 0.68
CcsQ9WU84 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CcsQ9WU84 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CcsQ9WU84 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CcsQ9WU84 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CcsQ9WU84 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CcsQ9WU84 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.3■□□□□ 0.68
CcsQ9WU84 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CcsQ9WU84 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CcsQ9WU84 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CcsQ9WU84 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CcsQ9WU84 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.26■□□□□ 0.67
CcsQ9WU84 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CcsQ9WU84 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CcsQ9WU84 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CcsQ9WU84 Amer2-203ENSMUST00000225247 2662 ntBASIC19.24■□□□□ 0.67
CcsQ9WU84 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CcsQ9WU84 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.24■□□□□ 0.67
CcsQ9WU84 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CcsQ9WU84 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CcsQ9WU84 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.23■□□□□ 0.67
CcsQ9WU84 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CcsQ9WU84 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CcsQ9WU84 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms