Protein–RNA interactions for Protein: Q9D7V2

Lysmd2, LysM and putative peptidoglycan-binding domain-containing protein 2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd2Q9D7V2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd2Q9D7V2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Lysmd2Q9D7V2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lysmd2Q9D7V2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lysmd2Q9D7V2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lysmd2Q9D7V2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lysmd2Q9D7V2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lysmd2Q9D7V2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Lysmd2Q9D7V2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lysmd2Q9D7V2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lysmd2Q9D7V2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lysmd2Q9D7V2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Lysmd2Q9D7V2 Gm25238-201ENSMUST00000174914 89 ntBASIC21.41■■□□□ 1.02
Lysmd2Q9D7V2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lysmd2Q9D7V2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Lysmd2Q9D7V2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lysmd2Q9D7V2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lysmd2Q9D7V2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lysmd2Q9D7V2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lysmd2Q9D7V2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lysmd2Q9D7V2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lysmd2Q9D7V2 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.36■■□□□ 1.01
Lysmd2Q9D7V2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lysmd2Q9D7V2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
Lysmd2Q9D7V2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Lysmd2Q9D7V2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.35■■□□□ 1.01
Lysmd2Q9D7V2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Lysmd2Q9D7V2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lysmd2Q9D7V2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Lysmd2Q9D7V2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lysmd2Q9D7V2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lysmd2Q9D7V2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lysmd2Q9D7V2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lysmd2Q9D7V2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lysmd2Q9D7V2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
Lysmd2Q9D7V2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lysmd2Q9D7V2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lysmd2Q9D7V2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Lysmd2Q9D7V2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lysmd2Q9D7V2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lysmd2Q9D7V2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lysmd2Q9D7V2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lysmd2Q9D7V2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.23■□□□□ 0.99
Lysmd2Q9D7V2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Lysmd2Q9D7V2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Lysmd2Q9D7V2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lysmd2Q9D7V2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Lysmd2Q9D7V2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lysmd2Q9D7V2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lysmd2Q9D7V2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lysmd2Q9D7V2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.16■□□□□ 0.98
Lysmd2Q9D7V2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd2Q9D7V2 Amer2-203ENSMUST00000225247 2662 ntBASIC21.15■□□□□ 0.98
Lysmd2Q9D7V2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lysmd2Q9D7V2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lysmd2Q9D7V2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.13■□□□□ 0.97
Lysmd2Q9D7V2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lysmd2Q9D7V2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lysmd2Q9D7V2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lysmd2Q9D7V2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lysmd2Q9D7V2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
Lysmd2Q9D7V2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lysmd2Q9D7V2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lysmd2Q9D7V2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.07■□□□□ 0.96
Lysmd2Q9D7V2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.06■□□□□ 0.96
Lysmd2Q9D7V2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lysmd2Q9D7V2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lysmd2Q9D7V2 Mipep-204ENSMUST00000225043 1548 ntBASIC21.04■□□□□ 0.96
Lysmd2Q9D7V2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Lysmd2Q9D7V2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lysmd2Q9D7V2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lysmd2Q9D7V2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lysmd2Q9D7V2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lysmd2Q9D7V2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lysmd2Q9D7V2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Lysmd2Q9D7V2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lysmd2Q9D7V2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Lysmd2Q9D7V2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Lysmd2Q9D7V2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Lysmd2Q9D7V2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Lysmd2Q9D7V2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Lysmd2Q9D7V2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Lysmd2Q9D7V2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Lysmd2Q9D7V2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Lysmd2Q9D7V2 Rab21-202ENSMUST00000218831 843 ntBASIC20.98■□□□□ 0.95
Lysmd2Q9D7V2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lysmd2Q9D7V2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.94■□□□□ 0.94
Lysmd2Q9D7V2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Lysmd2Q9D7V2 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.92■□□□□ 0.94
Lysmd2Q9D7V2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lysmd2Q9D7V2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lysmd2Q9D7V2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.9■□□□□ 0.94
Lysmd2Q9D7V2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Lysmd2Q9D7V2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Lysmd2Q9D7V2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.88■□□□□ 0.93
Lysmd2Q9D7V2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lysmd2Q9D7V2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lysmd2Q9D7V2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lysmd2Q9D7V2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Lysmd2Q9D7V2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms