Protein–RNA interactions for Protein: Q9CXE6

Xrcc3, DNA repair protein XRCC3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc3Q9CXE6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Xrcc3Q9CXE6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Xrcc3Q9CXE6 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.92■□□□□ 0.94
Xrcc3Q9CXE6 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.92■□□□□ 0.94
Xrcc3Q9CXE6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.91■□□□□ 0.94
Xrcc3Q9CXE6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Xrcc3Q9CXE6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Xrcc3Q9CXE6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Xrcc3Q9CXE6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.87■□□□□ 0.93
Xrcc3Q9CXE6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Xrcc3Q9CXE6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Xrcc3Q9CXE6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Xrcc3Q9CXE6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Xrcc3Q9CXE6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Xrcc3Q9CXE6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Xrcc3Q9CXE6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Xrcc3Q9CXE6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Xrcc3Q9CXE6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.81■□□□□ 0.92
Xrcc3Q9CXE6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Xrcc3Q9CXE6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Xrcc3Q9CXE6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Xrcc3Q9CXE6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Xrcc3Q9CXE6 Rab21-202ENSMUST00000218831 843 ntBASIC20.78■□□□□ 0.92
Xrcc3Q9CXE6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Xrcc3Q9CXE6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Xrcc3Q9CXE6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Xrcc3Q9CXE6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.76■□□□□ 0.91
Xrcc3Q9CXE6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Xrcc3Q9CXE6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Xrcc3Q9CXE6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Xrcc3Q9CXE6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Xrcc3Q9CXE6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Xrcc3Q9CXE6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Xrcc3Q9CXE6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Xrcc3Q9CXE6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Xrcc3Q9CXE6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Xrcc3Q9CXE6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Xrcc3Q9CXE6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Xrcc3Q9CXE6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Xrcc3Q9CXE6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.7■□□□□ 0.9
Xrcc3Q9CXE6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Xrcc3Q9CXE6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Xrcc3Q9CXE6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.69■□□□□ 0.9
Xrcc3Q9CXE6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Xrcc3Q9CXE6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Xrcc3Q9CXE6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Xrcc3Q9CXE6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Xrcc3Q9CXE6 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.67■□□□□ 0.9
Xrcc3Q9CXE6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Xrcc3Q9CXE6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Xrcc3Q9CXE6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Xrcc3Q9CXE6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Xrcc3Q9CXE6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
Xrcc3Q9CXE6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Xrcc3Q9CXE6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Xrcc3Q9CXE6 Mipep-204ENSMUST00000225043 1548 ntBASIC20.63■□□□□ 0.89
Xrcc3Q9CXE6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Xrcc3Q9CXE6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Xrcc3Q9CXE6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Xrcc3Q9CXE6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Xrcc3Q9CXE6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Xrcc3Q9CXE6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.59■□□□□ 0.89
Xrcc3Q9CXE6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Xrcc3Q9CXE6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Xrcc3Q9CXE6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Xrcc3Q9CXE6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Xrcc3Q9CXE6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Xrcc3Q9CXE6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.88
Xrcc3Q9CXE6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.57■□□□□ 0.88
Xrcc3Q9CXE6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xrcc3Q9CXE6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Xrcc3Q9CXE6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xrcc3Q9CXE6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xrcc3Q9CXE6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xrcc3Q9CXE6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Xrcc3Q9CXE6 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.54■□□□□ 0.88
Xrcc3Q9CXE6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xrcc3Q9CXE6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xrcc3Q9CXE6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Xrcc3Q9CXE6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Xrcc3Q9CXE6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Xrcc3Q9CXE6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Xrcc3Q9CXE6 Amer2-203ENSMUST00000225247 2662 ntBASIC20.49■□□□□ 0.87
Xrcc3Q9CXE6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.48■□□□□ 0.87
Xrcc3Q9CXE6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Xrcc3Q9CXE6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Xrcc3Q9CXE6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Xrcc3Q9CXE6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Xrcc3Q9CXE6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Xrcc3Q9CXE6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Xrcc3Q9CXE6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Xrcc3Q9CXE6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Xrcc3Q9CXE6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Xrcc3Q9CXE6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Xrcc3Q9CXE6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Xrcc3Q9CXE6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Xrcc3Q9CXE6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Xrcc3Q9CXE6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Xrcc3Q9CXE6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Xrcc3Q9CXE6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms