Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ddx47Q9CWX9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx47Q9CWX9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx47Q9CWX9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx47Q9CWX9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.79■■□□□ 1.88
Ddx47Q9CWX9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx47Q9CWX9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx47Q9CWX9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx47Q9CWX9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx47Q9CWX9 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.76■■□□□ 1.87
Ddx47Q9CWX9 Gm25238-201ENSMUST00000174914 89 ntBASIC26.75■■□□□ 1.87
Ddx47Q9CWX9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx47Q9CWX9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx47Q9CWX9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
Ddx47Q9CWX9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx47Q9CWX9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx47Q9CWX9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx47Q9CWX9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Ddx47Q9CWX9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ddx47Q9CWX9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Ddx47Q9CWX9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.71■■□□□ 1.87
Ddx47Q9CWX9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Ddx47Q9CWX9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Ddx47Q9CWX9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx47Q9CWX9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
Ddx47Q9CWX9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.68■■□□□ 1.86
Ddx47Q9CWX9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx47Q9CWX9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx47Q9CWX9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx47Q9CWX9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx47Q9CWX9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
Ddx47Q9CWX9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.64■■□□□ 1.86
Ddx47Q9CWX9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Ddx47Q9CWX9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ddx47Q9CWX9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx47Q9CWX9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
Ddx47Q9CWX9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
Ddx47Q9CWX9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ddx47Q9CWX9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx47Q9CWX9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx47Q9CWX9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ddx47Q9CWX9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx47Q9CWX9 Amer2-203ENSMUST00000225247 2662 ntBASIC26.53■■□□□ 1.84
Ddx47Q9CWX9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ddx47Q9CWX9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ddx47Q9CWX9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
Ddx47Q9CWX9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx47Q9CWX9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ddx47Q9CWX9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.49■■□□□ 1.83
Ddx47Q9CWX9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.48■■□□□ 1.83
Ddx47Q9CWX9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ddx47Q9CWX9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ddx47Q9CWX9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ddx47Q9CWX9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ddx47Q9CWX9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Ddx47Q9CWX9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Ddx47Q9CWX9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.39■■□□□ 1.81
Ddx47Q9CWX9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
Ddx47Q9CWX9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ddx47Q9CWX9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.37■■□□□ 1.81
Ddx47Q9CWX9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Ddx47Q9CWX9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ddx47Q9CWX9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ddx47Q9CWX9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Ddx47Q9CWX9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ddx47Q9CWX9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ddx47Q9CWX9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
Ddx47Q9CWX9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.34■■□□□ 1.81
Ddx47Q9CWX9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ddx47Q9CWX9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ddx47Q9CWX9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.33■■□□□ 1.81
Ddx47Q9CWX9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
Ddx47Q9CWX9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
Ddx47Q9CWX9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ddx47Q9CWX9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ddx47Q9CWX9 Mipep-204ENSMUST00000225043 1548 ntBASIC26.29■■□□□ 1.8
Ddx47Q9CWX9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Ddx47Q9CWX9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ddx47Q9CWX9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ddx47Q9CWX9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.26■■□□□ 1.79
Ddx47Q9CWX9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Ddx47Q9CWX9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ddx47Q9CWX9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
Ddx47Q9CWX9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ddx47Q9CWX9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Ddx47Q9CWX9 Rab21-202ENSMUST00000218831 843 ntBASIC26.22■■□□□ 1.79
Ddx47Q9CWX9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ddx47Q9CWX9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ddx47Q9CWX9 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.18■■□□□ 1.78
Ddx47Q9CWX9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx47Q9CWX9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.14■■□□□ 1.78
Ddx47Q9CWX9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx47Q9CWX9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx47Q9CWX9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Ddx47Q9CWX9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx47Q9CWX9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.08■■□□□ 1.77
Ddx47Q9CWX9 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.08■■□□□ 1.77
Ddx47Q9CWX9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx47Q9CWX9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Ddx47Q9CWX9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms