Protein–RNA interactions for Protein: Q99L43

Cds2, Phosphatidate cytidylyltransferase 2, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cds2Q99L43 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cds2Q99L43 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cds2Q99L43 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cds2Q99L43 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cds2Q99L43 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cds2Q99L43 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cds2Q99L43 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cds2Q99L43 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Cds2Q99L43 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cds2Q99L43 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cds2Q99L43 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.86■□□□□ 0.93
Cds2Q99L43 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cds2Q99L43 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cds2Q99L43 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.84■□□□□ 0.93
Cds2Q99L43 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cds2Q99L43 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cds2Q99L43 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Cds2Q99L43 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cds2Q99L43 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cds2Q99L43 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cds2Q99L43 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Cds2Q99L43 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cds2Q99L43 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cds2Q99L43 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cds2Q99L43 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.77■□□□□ 0.92
Cds2Q99L43 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cds2Q99L43 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cds2Q99L43 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.76■□□□□ 0.91
Cds2Q99L43 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cds2Q99L43 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cds2Q99L43 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cds2Q99L43 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cds2Q99L43 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cds2Q99L43 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cds2Q99L43 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cds2Q99L43 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cds2Q99L43 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cds2Q99L43 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cds2Q99L43 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cds2Q99L43 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cds2Q99L43 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cds2Q99L43 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cds2Q99L43 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cds2Q99L43 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cds2Q99L43 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cds2Q99L43 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cds2Q99L43 Mipep-204ENSMUST00000225043 1548 ntBASIC20.68■□□□□ 0.9
Cds2Q99L43 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cds2Q99L43 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cds2Q99L43 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cds2Q99L43 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cds2Q99L43 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cds2Q99L43 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cds2Q99L43 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.65■□□□□ 0.9
Cds2Q99L43 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.64■□□□□ 0.89
Cds2Q99L43 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cds2Q99L43 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cds2Q99L43 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.63■□□□□ 0.89
Cds2Q99L43 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cds2Q99L43 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cds2Q99L43 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cds2Q99L43 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Cds2Q99L43 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cds2Q99L43 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cds2Q99L43 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cds2Q99L43 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cds2Q99L43 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cds2Q99L43 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cds2Q99L43 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cds2Q99L43 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.57■□□□□ 0.88
Cds2Q99L43 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cds2Q99L43 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cds2Q99L43 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cds2Q99L43 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
Cds2Q99L43 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cds2Q99L43 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cds2Q99L43 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cds2Q99L43 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.54■□□□□ 0.88
Cds2Q99L43 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cds2Q99L43 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cds2Q99L43 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cds2Q99L43 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cds2Q99L43 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cds2Q99L43 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cds2Q99L43 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.48■□□□□ 0.87
Cds2Q99L43 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cds2Q99L43 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cds2Q99L43 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cds2Q99L43 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cds2Q99L43 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cds2Q99L43 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cds2Q99L43 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Cds2Q99L43 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cds2Q99L43 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cds2Q99L43 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Cds2Q99L43 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Cds2Q99L43 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cds2Q99L43 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cds2Q99L43 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cds2Q99L43 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms