Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhga4Q91XY4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhga4Q91XY4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.36■■□□□ 1.65
Pcdhga4Q91XY4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Pcdhga4Q91XY4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhga4Q91XY4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhga4Q91XY4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhga4Q91XY4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhga4Q91XY4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhga4Q91XY4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhga4Q91XY4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhga4Q91XY4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhga4Q91XY4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.29■■□□□ 1.64
Pcdhga4Q91XY4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Pcdhga4Q91XY4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhga4Q91XY4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhga4Q91XY4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhga4Q91XY4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhga4Q91XY4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhga4Q91XY4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhga4Q91XY4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Pcdhga4Q91XY4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.22■■□□□ 1.63
Pcdhga4Q91XY4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
Pcdhga4Q91XY4 Peli2-204ENSMUST00000226513 1320 ntBASIC25.19■■□□□ 1.62
Pcdhga4Q91XY4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhga4Q91XY4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.18■■□□□ 1.62
Pcdhga4Q91XY4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Pcdhga4Q91XY4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhga4Q91XY4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhga4Q91XY4 Gm16148-201ENSMUST00000119653 893 ntBASIC25.16■■□□□ 1.62
Pcdhga4Q91XY4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Pcdhga4Q91XY4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhga4Q91XY4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Pcdhga4Q91XY4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhga4Q91XY4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Pcdhga4Q91XY4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Pcdhga4Q91XY4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhga4Q91XY4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhga4Q91XY4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhga4Q91XY4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhga4Q91XY4 Zfp131-205ENSMUST00000223812 663 ntBASIC25.02■■□□□ 1.6
Pcdhga4Q91XY4 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhga4Q91XY4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhga4Q91XY4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.97■■□□□ 1.59
Pcdhga4Q91XY4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhga4Q91XY4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhga4Q91XY4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhga4Q91XY4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhga4Q91XY4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhga4Q91XY4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhga4Q91XY4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhga4Q91XY4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhga4Q91XY4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhga4Q91XY4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhga4Q91XY4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
Pcdhga4Q91XY4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhga4Q91XY4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhga4Q91XY4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhga4Q91XY4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.86■■□□□ 1.57
Pcdhga4Q91XY4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.86■■□□□ 1.57
Pcdhga4Q91XY4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
Pcdhga4Q91XY4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhga4Q91XY4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhga4Q91XY4 Zxda-201ENSMUST00000117281 2621 ntBASIC24.82■■□□□ 1.56
Pcdhga4Q91XY4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
Pcdhga4Q91XY4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhga4Q91XY4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhga4Q91XY4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.79■■□□□ 1.56
Pcdhga4Q91XY4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
Pcdhga4Q91XY4 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.78■■□□□ 1.56
Pcdhga4Q91XY4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Pcdhga4Q91XY4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.76■■□□□ 1.55
Pcdhga4Q91XY4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhga4Q91XY4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhga4Q91XY4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.73■■□□□ 1.55
Pcdhga4Q91XY4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhga4Q91XY4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.72■■□□□ 1.55
Pcdhga4Q91XY4 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.72■■□□□ 1.55
Pcdhga4Q91XY4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhga4Q91XY4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhga4Q91XY4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhga4Q91XY4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhga4Q91XY4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.71■■□□□ 1.55
Pcdhga4Q91XY4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhga4Q91XY4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhga4Q91XY4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Pcdhga4Q91XY4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhga4Q91XY4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhga4Q91XY4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhga4Q91XY4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhga4Q91XY4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhga4Q91XY4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhga4Q91XY4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.63■■□□□ 1.53
Pcdhga4Q91XY4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhga4Q91XY4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Pcdhga4Q91XY4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhga4Q91XY4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhga4Q91XY4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
Pcdhga4Q91XY4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhga4Q91XY4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 109.5 ms