Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.94■■□□□ 1.74
Pcdhga9Q91XX9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Pcdhga9Q91XX9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.93■■□□□ 1.74
Pcdhga9Q91XX9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Pcdhga9Q91XX9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Pcdhga9Q91XX9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Pcdhga9Q91XX9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdhga9Q91XX9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Pcdhga9Q91XX9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdhga9Q91XX9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdhga9Q91XX9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdhga9Q91XX9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdhga9Q91XX9 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.85■■□□□ 1.73
Pcdhga9Q91XX9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdhga9Q91XX9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhga9Q91XX9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhga9Q91XX9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
Pcdhga9Q91XX9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdhga9Q91XX9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhga9Q91XX9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhga9Q91XX9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdhga9Q91XX9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdhga9Q91XX9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.75■■□□□ 1.71
Pcdhga9Q91XX9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
Pcdhga9Q91XX9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhga9Q91XX9 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.69■■□□□ 1.7
Pcdhga9Q91XX9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhga9Q91XX9 Zfp131-205ENSMUST00000223812 663 ntBASIC25.67■■□□□ 1.7
Pcdhga9Q91XX9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhga9Q91XX9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhga9Q91XX9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdhga9Q91XX9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhga9Q91XX9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhga9Q91XX9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhga9Q91XX9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhga9Q91XX9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
Pcdhga9Q91XX9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhga9Q91XX9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.59■■□□□ 1.69
Pcdhga9Q91XX9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhga9Q91XX9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhga9Q91XX9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhga9Q91XX9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhga9Q91XX9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhga9Q91XX9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhga9Q91XX9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhga9Q91XX9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhga9Q91XX9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhga9Q91XX9 Peli2-204ENSMUST00000226513 1320 ntBASIC25.51■■□□□ 1.67
Pcdhga9Q91XX9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Pcdhga9Q91XX9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhga9Q91XX9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhga9Q91XX9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhga9Q91XX9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.47■■□□□ 1.67
Pcdhga9Q91XX9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhga9Q91XX9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhga9Q91XX9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhga9Q91XX9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.45■■□□□ 1.66
Pcdhga9Q91XX9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Pcdhga9Q91XX9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Pcdhga9Q91XX9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhga9Q91XX9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.43■■□□□ 1.66
Pcdhga9Q91XX9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhga9Q91XX9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Pcdhga9Q91XX9 Gm16148-201ENSMUST00000119653 893 ntBASIC25.41■■□□□ 1.66
Pcdhga9Q91XX9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhga9Q91XX9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.4■■□□□ 1.66
Pcdhga9Q91XX9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdhga9Q91XX9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdhga9Q91XX9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhga9Q91XX9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Pcdhga9Q91XX9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
Pcdhga9Q91XX9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhga9Q91XX9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhga9Q91XX9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhga9Q91XX9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.27■■□□□ 1.64
Pcdhga9Q91XX9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhga9Q91XX9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
Pcdhga9Q91XX9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhga9Q91XX9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhga9Q91XX9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhga9Q91XX9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhga9Q91XX9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
Pcdhga9Q91XX9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Pcdhga9Q91XX9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhga9Q91XX9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhga9Q91XX9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.21■■□□□ 1.63
Pcdhga9Q91XX9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhga9Q91XX9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Pcdhga9Q91XX9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhga9Q91XX9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Pcdhga9Q91XX9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhga9Q91XX9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhga9Q91XX9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhga9Q91XX9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhga9Q91XX9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
Pcdhga9Q91XX9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhga9Q91XX9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
Pcdhga9Q91XX9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhga9Q91XX9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhga9Q91XX9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.15■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms