Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhgc3Q91XX1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Pcdhgc3Q91XX1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhgc3Q91XX1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhgc3Q91XX1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhgc3Q91XX1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhgc3Q91XX1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Pcdhgc3Q91XX1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhgc3Q91XX1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhgc3Q91XX1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.47■■□□□ 1.51
Pcdhgc3Q91XX1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhgc3Q91XX1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.46■■□□□ 1.51
Pcdhgc3Q91XX1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.46■■□□□ 1.51
Pcdhgc3Q91XX1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhgc3Q91XX1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Pcdhgc3Q91XX1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhgc3Q91XX1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.44■■□□□ 1.5
Pcdhgc3Q91XX1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhgc3Q91XX1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhgc3Q91XX1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhgc3Q91XX1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhgc3Q91XX1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhgc3Q91XX1 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.42■■□□□ 1.5
Pcdhgc3Q91XX1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhgc3Q91XX1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhgc3Q91XX1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdhgc3Q91XX1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdhgc3Q91XX1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.39■■□□□ 1.49
Pcdhgc3Q91XX1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.38■■□□□ 1.49
Pcdhgc3Q91XX1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhgc3Q91XX1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhgc3Q91XX1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.35■■□□□ 1.49
Pcdhgc3Q91XX1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Pcdhgc3Q91XX1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhgc3Q91XX1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Pcdhgc3Q91XX1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhgc3Q91XX1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhgc3Q91XX1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhgc3Q91XX1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhgc3Q91XX1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhgc3Q91XX1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhgc3Q91XX1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhgc3Q91XX1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhgc3Q91XX1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Pcdhgc3Q91XX1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhgc3Q91XX1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhgc3Q91XX1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhgc3Q91XX1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
Pcdhgc3Q91XX1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Pcdhgc3Q91XX1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhgc3Q91XX1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhgc3Q91XX1 Rab21-202ENSMUST00000218831 843 ntBASIC24.18■■□□□ 1.46
Pcdhgc3Q91XX1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhgc3Q91XX1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Pcdhgc3Q91XX1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Pcdhgc3Q91XX1 Amer2-203ENSMUST00000225247 2662 ntBASIC24.14■■□□□ 1.46
Pcdhgc3Q91XX1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhgc3Q91XX1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhgc3Q91XX1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Pcdhgc3Q91XX1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.1■■□□□ 1.45
Pcdhgc3Q91XX1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhgc3Q91XX1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhgc3Q91XX1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.08■■□□□ 1.45
Pcdhgc3Q91XX1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhgc3Q91XX1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.06■■□□□ 1.44
Pcdhgc3Q91XX1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Pcdhgc3Q91XX1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhgc3Q91XX1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhgc3Q91XX1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhgc3Q91XX1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhgc3Q91XX1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhgc3Q91XX1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pcdhgc3Q91XX1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Pcdhgc3Q91XX1 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.98■■□□□ 1.43
Pcdhgc3Q91XX1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhgc3Q91XX1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdhgc3Q91XX1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.98■■□□□ 1.43
Pcdhgc3Q91XX1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.96■■□□□ 1.43
Pcdhgc3Q91XX1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhgc3Q91XX1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhgc3Q91XX1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhgc3Q91XX1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhgc3Q91XX1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhgc3Q91XX1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhgc3Q91XX1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Pcdhgc3Q91XX1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhgc3Q91XX1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhgc3Q91XX1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.9■■□□□ 1.42
Pcdhgc3Q91XX1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
Pcdhgc3Q91XX1 Gm25262-201ENSMUST00000174934 133 ntBASIC23.89■■□□□ 1.41
Pcdhgc3Q91XX1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhgc3Q91XX1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgc3Q91XX1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhgc3Q91XX1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhgc3Q91XX1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.86■■□□□ 1.41
Pcdhgc3Q91XX1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Pcdhgc3Q91XX1 Mipep-204ENSMUST00000225043 1548 ntBASIC23.84■■□□□ 1.41
Pcdhgc3Q91XX1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdhgc3Q91XX1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Pcdhgc3Q91XX1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 152.6 ms