Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rab40bQ8VHP8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rab40bQ8VHP8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.41■■□□□ 1.34
Rab40bQ8VHP8 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.4■■□□□ 1.34
Rab40bQ8VHP8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Rab40bQ8VHP8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rab40bQ8VHP8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Rab40bQ8VHP8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.37■■□□□ 1.33
Rab40bQ8VHP8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rab40bQ8VHP8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rab40bQ8VHP8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rab40bQ8VHP8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rab40bQ8VHP8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rab40bQ8VHP8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.35■■□□□ 1.33
Rab40bQ8VHP8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Rab40bQ8VHP8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rab40bQ8VHP8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rab40bQ8VHP8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rab40bQ8VHP8 Zxda-201ENSMUST00000117281 2621 ntBASIC23.31■■□□□ 1.32
Rab40bQ8VHP8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Rab40bQ8VHP8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rab40bQ8VHP8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rab40bQ8VHP8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rab40bQ8VHP8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rab40bQ8VHP8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rab40bQ8VHP8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rab40bQ8VHP8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rab40bQ8VHP8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Rab40bQ8VHP8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Rab40bQ8VHP8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rab40bQ8VHP8 Mipep-204ENSMUST00000225043 1548 ntBASIC23.23■■□□□ 1.31
Rab40bQ8VHP8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rab40bQ8VHP8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Rab40bQ8VHP8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.22■■□□□ 1.31
Rab40bQ8VHP8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rab40bQ8VHP8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rab40bQ8VHP8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rab40bQ8VHP8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rab40bQ8VHP8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rab40bQ8VHP8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rab40bQ8VHP8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rab40bQ8VHP8 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.17■■□□□ 1.3
Rab40bQ8VHP8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.15■■□□□ 1.3
Rab40bQ8VHP8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rab40bQ8VHP8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Rab40bQ8VHP8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rab40bQ8VHP8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rab40bQ8VHP8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rab40bQ8VHP8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rab40bQ8VHP8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rab40bQ8VHP8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rab40bQ8VHP8 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.11■■□□□ 1.29
Rab40bQ8VHP8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rab40bQ8VHP8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Rab40bQ8VHP8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rab40bQ8VHP8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rab40bQ8VHP8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rab40bQ8VHP8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rab40bQ8VHP8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rab40bQ8VHP8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rab40bQ8VHP8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rab40bQ8VHP8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
Rab40bQ8VHP8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rab40bQ8VHP8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.04■■□□□ 1.28
Rab40bQ8VHP8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rab40bQ8VHP8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.03■■□□□ 1.28
Rab40bQ8VHP8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rab40bQ8VHP8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rab40bQ8VHP8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
Rab40bQ8VHP8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rab40bQ8VHP8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rab40bQ8VHP8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rab40bQ8VHP8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Rab40bQ8VHP8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rab40bQ8VHP8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rab40bQ8VHP8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Rab40bQ8VHP8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rab40bQ8VHP8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rab40bQ8VHP8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
Rab40bQ8VHP8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Rab40bQ8VHP8 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.84■■□□□ 1.25
Rab40bQ8VHP8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rab40bQ8VHP8 Amer2-203ENSMUST00000225247 2662 ntBASIC22.84■■□□□ 1.25
Rab40bQ8VHP8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Rab40bQ8VHP8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Rab40bQ8VHP8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Rab40bQ8VHP8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rab40bQ8VHP8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
Rab40bQ8VHP8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rab40bQ8VHP8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rab40bQ8VHP8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rab40bQ8VHP8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rab40bQ8VHP8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Rab40bQ8VHP8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rab40bQ8VHP8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rab40bQ8VHP8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
Rab40bQ8VHP8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rab40bQ8VHP8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rab40bQ8VHP8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.73■■□□□ 1.23
Rab40bQ8VHP8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms