Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
Sft2d2Q8VD57 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21■□□□□ 0.95
Sft2d2Q8VD57 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
Sft2d2Q8VD57 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.98■□□□□ 0.95
Sft2d2Q8VD57 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sft2d2Q8VD57 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sft2d2Q8VD57 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sft2d2Q8VD57 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sft2d2Q8VD57 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.93■□□□□ 0.94
Sft2d2Q8VD57 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sft2d2Q8VD57 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.92■□□□□ 0.94
Sft2d2Q8VD57 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sft2d2Q8VD57 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sft2d2Q8VD57 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sft2d2Q8VD57 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sft2d2Q8VD57 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sft2d2Q8VD57 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sft2d2Q8VD57 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sft2d2Q8VD57 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sft2d2Q8VD57 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sft2d2Q8VD57 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sft2d2Q8VD57 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sft2d2Q8VD57 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sft2d2Q8VD57 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sft2d2Q8VD57 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sft2d2Q8VD57 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Sft2d2Q8VD57 Gm27325-201ENSMUST00000175467 74 ntBASIC20.78■□□□□ 0.92
Sft2d2Q8VD57 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Sft2d2Q8VD57 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sft2d2Q8VD57 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sft2d2Q8VD57 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sft2d2Q8VD57 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sft2d2Q8VD57 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sft2d2Q8VD57 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sft2d2Q8VD57 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sft2d2Q8VD57 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sft2d2Q8VD57 Amer2-203ENSMUST00000225247 2662 ntBASIC20.72■□□□□ 0.91
Sft2d2Q8VD57 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sft2d2Q8VD57 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sft2d2Q8VD57 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Sft2d2Q8VD57 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Sft2d2Q8VD57 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sft2d2Q8VD57 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Sft2d2Q8VD57 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.68■□□□□ 0.9
Sft2d2Q8VD57 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sft2d2Q8VD57 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.67■□□□□ 0.9
Sft2d2Q8VD57 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sft2d2Q8VD57 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sft2d2Q8VD57 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Sft2d2Q8VD57 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sft2d2Q8VD57 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sft2d2Q8VD57 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.63■□□□□ 0.89
Sft2d2Q8VD57 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sft2d2Q8VD57 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Sft2d2Q8VD57 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sft2d2Q8VD57 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sft2d2Q8VD57 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sft2d2Q8VD57 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sft2d2Q8VD57 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sft2d2Q8VD57 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sft2d2Q8VD57 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.59■□□□□ 0.89
Sft2d2Q8VD57 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sft2d2Q8VD57 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sft2d2Q8VD57 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.57■□□□□ 0.88
Sft2d2Q8VD57 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sft2d2Q8VD57 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sft2d2Q8VD57 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Sft2d2Q8VD57 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sft2d2Q8VD57 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sft2d2Q8VD57 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sft2d2Q8VD57 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sft2d2Q8VD57 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Sft2d2Q8VD57 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Sft2d2Q8VD57 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sft2d2Q8VD57 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sft2d2Q8VD57 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sft2d2Q8VD57 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Sft2d2Q8VD57 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sft2d2Q8VD57 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sft2d2Q8VD57 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sft2d2Q8VD57 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Sft2d2Q8VD57 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sft2d2Q8VD57 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sft2d2Q8VD57 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sft2d2Q8VD57 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sft2d2Q8VD57 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.44■□□□□ 0.86
Sft2d2Q8VD57 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.43■□□□□ 0.86
Sft2d2Q8VD57 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sft2d2Q8VD57 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Sft2d2Q8VD57 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sft2d2Q8VD57 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sft2d2Q8VD57 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sft2d2Q8VD57 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sft2d2Q8VD57 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sft2d2Q8VD57 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.37■□□□□ 0.85
Sft2d2Q8VD57 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Sft2d2Q8VD57 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sft2d2Q8VD57 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sft2d2Q8VD57 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sft2d2Q8VD57 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms