Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Cacnb1Q8R3Z5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
Cacnb1Q8R3Z5 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.1■■■□□ 2.25
Cacnb1Q8R3Z5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Cacnb1Q8R3Z5 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Cacnb1Q8R3Z5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
Cacnb1Q8R3Z5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Cacnb1Q8R3Z5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Cacnb1Q8R3Z5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.04■■■□□ 2.24
Cacnb1Q8R3Z5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Cacnb1Q8R3Z5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29■■■□□ 2.23
Cacnb1Q8R3Z5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Cacnb1Q8R3Z5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Cacnb1Q8R3Z5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Cacnb1Q8R3Z5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Cacnb1Q8R3Z5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Cacnb1Q8R3Z5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Cacnb1Q8R3Z5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Cacnb1Q8R3Z5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Cacnb1Q8R3Z5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Cacnb1Q8R3Z5 Gm24804-201ENSMUST00000174982 85 ntBASIC28.87■■■□□ 2.21
Cacnb1Q8R3Z5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Cacnb1Q8R3Z5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Cacnb1Q8R3Z5 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.86■■■□□ 2.21
Cacnb1Q8R3Z5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Cacnb1Q8R3Z5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Cacnb1Q8R3Z5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Cacnb1Q8R3Z5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
Cacnb1Q8R3Z5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Cacnb1Q8R3Z5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
Cacnb1Q8R3Z5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Cacnb1Q8R3Z5 Peli2-204ENSMUST00000226513 1320 ntBASIC28.72■■■□□ 2.19
Cacnb1Q8R3Z5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.72■■■□□ 2.19
Cacnb1Q8R3Z5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Cacnb1Q8R3Z5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Cacnb1Q8R3Z5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Cacnb1Q8R3Z5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Cacnb1Q8R3Z5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Cacnb1Q8R3Z5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Cacnb1Q8R3Z5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Cacnb1Q8R3Z5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Cacnb1Q8R3Z5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.66■■■□□ 2.18
Cacnb1Q8R3Z5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.66■■■□□ 2.18
Cacnb1Q8R3Z5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Cacnb1Q8R3Z5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
Cacnb1Q8R3Z5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.65■■■□□ 2.18
Cacnb1Q8R3Z5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.62■■■□□ 2.17
Cacnb1Q8R3Z5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
Cacnb1Q8R3Z5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
Cacnb1Q8R3Z5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Cacnb1Q8R3Z5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Cacnb1Q8R3Z5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Cacnb1Q8R3Z5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Cacnb1Q8R3Z5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Cacnb1Q8R3Z5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Cacnb1Q8R3Z5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cacnb1Q8R3Z5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.55■■■□□ 2.16
Cacnb1Q8R3Z5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Cacnb1Q8R3Z5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Cacnb1Q8R3Z5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Cacnb1Q8R3Z5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Cacnb1Q8R3Z5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Cacnb1Q8R3Z5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.15
Cacnb1Q8R3Z5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Cacnb1Q8R3Z5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Cacnb1Q8R3Z5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Cacnb1Q8R3Z5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.42■■■□□ 2.14
Cacnb1Q8R3Z5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Cacnb1Q8R3Z5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cacnb1Q8R3Z5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.41■■■□□ 2.14
Cacnb1Q8R3Z5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
Cacnb1Q8R3Z5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Cacnb1Q8R3Z5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.39■■■□□ 2.14
Cacnb1Q8R3Z5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cacnb1Q8R3Z5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cacnb1Q8R3Z5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Cacnb1Q8R3Z5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cacnb1Q8R3Z5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Cacnb1Q8R3Z5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.34■■■□□ 2.13
Cacnb1Q8R3Z5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cacnb1Q8R3Z5 Gm16148-201ENSMUST00000119653 893 ntBASIC28.33■■■□□ 2.13
Cacnb1Q8R3Z5 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cacnb1Q8R3Z5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cacnb1Q8R3Z5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cacnb1Q8R3Z5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cacnb1Q8R3Z5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.29■■■□□ 2.12
Cacnb1Q8R3Z5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cacnb1Q8R3Z5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Cacnb1Q8R3Z5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Cacnb1Q8R3Z5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cacnb1Q8R3Z5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.27■■■□□ 2.12
Cacnb1Q8R3Z5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.27■■■□□ 2.12
Cacnb1Q8R3Z5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.26■■■□□ 2.11
Cacnb1Q8R3Z5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Cacnb1Q8R3Z5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cacnb1Q8R3Z5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Cacnb1Q8R3Z5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Cacnb1Q8R3Z5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Cacnb1Q8R3Z5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cacnb1Q8R3Z5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.23■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms