Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Pspc1Q8R326 Gm16148-201ENSMUST00000119653 893 ntBASIC30.61■■■□□ 2.49
Pspc1Q8R326 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Pspc1Q8R326 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Pspc1Q8R326 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Pspc1Q8R326 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Pspc1Q8R326 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Pspc1Q8R326 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.57■■■□□ 2.48
Pspc1Q8R326 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.56■■■□□ 2.48
Pspc1Q8R326 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Pspc1Q8R326 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.52■■■□□ 2.48
Pspc1Q8R326 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Pspc1Q8R326 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
Pspc1Q8R326 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Pspc1Q8R326 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Pspc1Q8R326 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Pspc1Q8R326 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Pspc1Q8R326 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Pspc1Q8R326 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.4■■■□□ 2.46
Pspc1Q8R326 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Pspc1Q8R326 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Pspc1Q8R326 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Pspc1Q8R326 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Pspc1Q8R326 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Pspc1Q8R326 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pspc1Q8R326 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Pspc1Q8R326 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
Pspc1Q8R326 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pspc1Q8R326 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.33■■■□□ 2.45
Pspc1Q8R326 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.32■■■□□ 2.44
Pspc1Q8R326 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.32■■■□□ 2.44
Pspc1Q8R326 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
Pspc1Q8R326 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Pspc1Q8R326 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Pspc1Q8R326 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pspc1Q8R326 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pspc1Q8R326 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pspc1Q8R326 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
Pspc1Q8R326 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.2■■■□□ 2.43
Pspc1Q8R326 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
Pspc1Q8R326 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Pspc1Q8R326 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.19■■■□□ 2.42
Pspc1Q8R326 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.17■■■□□ 2.42
Pspc1Q8R326 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Pspc1Q8R326 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Pspc1Q8R326 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.13■■■□□ 2.41
Pspc1Q8R326 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Pspc1Q8R326 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.09■■■□□ 2.41
Pspc1Q8R326 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Pspc1Q8R326 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Pspc1Q8R326 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Pspc1Q8R326 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Pspc1Q8R326 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Pspc1Q8R326 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Pspc1Q8R326 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
Pspc1Q8R326 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
Pspc1Q8R326 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.97■■■□□ 2.39
Pspc1Q8R326 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Pspc1Q8R326 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Pspc1Q8R326 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.38
Pspc1Q8R326 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.92■■■□□ 2.38
Pspc1Q8R326 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pspc1Q8R326 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.9■■■□□ 2.38
Pspc1Q8R326 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Pspc1Q8R326 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Pspc1Q8R326 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Pspc1Q8R326 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Pspc1Q8R326 Gm45855-201ENSMUST00000212546 880 ntBASIC29.85■■■□□ 2.37
Pspc1Q8R326 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Pspc1Q8R326 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.84■■■□□ 2.37
Pspc1Q8R326 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC29.84■■■□□ 2.37
Pspc1Q8R326 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.84■■■□□ 2.37
Pspc1Q8R326 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Pspc1Q8R326 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.82■■■□□ 2.36
Pspc1Q8R326 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
Pspc1Q8R326 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Pspc1Q8R326 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Pspc1Q8R326 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.77■■■□□ 2.36
Pspc1Q8R326 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Pspc1Q8R326 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Pspc1Q8R326 Gm9397-201ENSMUST00000200125 605 ntBASIC29.74■■■□□ 2.35
Pspc1Q8R326 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Pspc1Q8R326 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Pspc1Q8R326 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Pspc1Q8R326 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Pspc1Q8R326 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Pspc1Q8R326 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pspc1Q8R326 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pspc1Q8R326 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.7■■■□□ 2.35
Pspc1Q8R326 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Pspc1Q8R326 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Pspc1Q8R326 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Pspc1Q8R326 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29.67■■■□□ 2.34
Pspc1Q8R326 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29.66■■■□□ 2.34
Pspc1Q8R326 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
Pspc1Q8R326 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Pspc1Q8R326 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29.63■■■□□ 2.33
Pspc1Q8R326 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC29.63■■■□□ 2.33
Pspc1Q8R326 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.62■■■□□ 2.33
Pspc1Q8R326 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.62■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms