Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Gtf3c5Q8R2T8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Gtf3c5Q8R2T8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.51■■■□□ 2.47
Gtf3c5Q8R2T8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.5■■■□□ 2.47
Gtf3c5Q8R2T8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Gtf3c5Q8R2T8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Gtf3c5Q8R2T8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Gtf3c5Q8R2T8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Gtf3c5Q8R2T8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
Gtf3c5Q8R2T8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Gtf3c5Q8R2T8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Gtf3c5Q8R2T8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Gtf3c5Q8R2T8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Gtf3c5Q8R2T8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Gtf3c5Q8R2T8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Gtf3c5Q8R2T8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Gtf3c5Q8R2T8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Gtf3c5Q8R2T8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Gtf3c5Q8R2T8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Gtf3c5Q8R2T8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Gtf3c5Q8R2T8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
Gtf3c5Q8R2T8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
Gtf3c5Q8R2T8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
Gtf3c5Q8R2T8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Gtf3c5Q8R2T8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Gtf3c5Q8R2T8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Gtf3c5Q8R2T8 Peli2-204ENSMUST00000226513 1320 ntBASIC30.23■■■□□ 2.43
Gtf3c5Q8R2T8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Gtf3c5Q8R2T8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Gtf3c5Q8R2T8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.23■■■□□ 2.43
Gtf3c5Q8R2T8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.23■■■□□ 2.43
Gtf3c5Q8R2T8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Gtf3c5Q8R2T8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Gtf3c5Q8R2T8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Gtf3c5Q8R2T8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Gtf3c5Q8R2T8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Gtf3c5Q8R2T8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
Gtf3c5Q8R2T8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.42
Gtf3c5Q8R2T8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Gtf3c5Q8R2T8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Gtf3c5Q8R2T8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Gtf3c5Q8R2T8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
Gtf3c5Q8R2T8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
Gtf3c5Q8R2T8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Gtf3c5Q8R2T8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Gtf3c5Q8R2T8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Gtf3c5Q8R2T8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Gtf3c5Q8R2T8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Gtf3c5Q8R2T8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Gtf3c5Q8R2T8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
Gtf3c5Q8R2T8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Gtf3c5Q8R2T8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.39
Gtf3c5Q8R2T8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.01■■■□□ 2.39
Gtf3c5Q8R2T8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Gtf3c5Q8R2T8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30■■■□□ 2.39
Gtf3c5Q8R2T8 Gm16148-201ENSMUST00000119653 893 ntBASIC30■■■□□ 2.39
Gtf3c5Q8R2T8 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.98■■■□□ 2.39
Gtf3c5Q8R2T8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Gtf3c5Q8R2T8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Gtf3c5Q8R2T8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Gtf3c5Q8R2T8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Gtf3c5Q8R2T8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Gtf3c5Q8R2T8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.92■■■□□ 2.38
Gtf3c5Q8R2T8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Gtf3c5Q8R2T8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Gtf3c5Q8R2T8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Gtf3c5Q8R2T8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC29.9■■■□□ 2.38
Gtf3c5Q8R2T8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Gtf3c5Q8R2T8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Gtf3c5Q8R2T8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Gtf3c5Q8R2T8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Gtf3c5Q8R2T8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Gtf3c5Q8R2T8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Gtf3c5Q8R2T8 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.81■■■□□ 2.36
Gtf3c5Q8R2T8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC29.8■■■□□ 2.36
Gtf3c5Q8R2T8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Gtf3c5Q8R2T8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.78■■■□□ 2.36
Gtf3c5Q8R2T8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Gtf3c5Q8R2T8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.76■■■□□ 2.36
Gtf3c5Q8R2T8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Gtf3c5Q8R2T8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.75■■■□□ 2.35
Gtf3c5Q8R2T8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.73■■■□□ 2.35
Gtf3c5Q8R2T8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
Gtf3c5Q8R2T8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Gtf3c5Q8R2T8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.72■■■□□ 2.35
Gtf3c5Q8R2T8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Gtf3c5Q8R2T8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Gtf3c5Q8R2T8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Gtf3c5Q8R2T8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Gtf3c5Q8R2T8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Gtf3c5Q8R2T8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Gtf3c5Q8R2T8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Gtf3c5Q8R2T8 Zfp131-205ENSMUST00000223812 663 ntBASIC29.62■■■□□ 2.33
Gtf3c5Q8R2T8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
Gtf3c5Q8R2T8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
Gtf3c5Q8R2T8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29.59■■■□□ 2.33
Gtf3c5Q8R2T8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Gtf3c5Q8R2T8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC29.58■■■□□ 2.33
Gtf3c5Q8R2T8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
Gtf3c5Q8R2T8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.57■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms