Protein–RNA interactions for Protein: Q8CHP6

Phc3, Polyhomeotic-like protein 3, mousemouse

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phc3Q8CHP6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Phc3Q8CHP6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Phc3Q8CHP6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Phc3Q8CHP6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
Phc3Q8CHP6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.81■■■□□ 2.04
Phc3Q8CHP6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Phc3Q8CHP6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Phc3Q8CHP6 Gm25262-201ENSMUST00000174934 133 ntBASIC27.78■■■□□ 2.04
Phc3Q8CHP6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Phc3Q8CHP6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Phc3Q8CHP6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Phc3Q8CHP6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Phc3Q8CHP6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Phc3Q8CHP6 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.74■■■□□ 2.03
Phc3Q8CHP6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Phc3Q8CHP6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
Phc3Q8CHP6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
Phc3Q8CHP6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
Phc3Q8CHP6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Phc3Q8CHP6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.67■■■□□ 2.02
Phc3Q8CHP6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
Phc3Q8CHP6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Phc3Q8CHP6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Phc3Q8CHP6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Phc3Q8CHP6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Phc3Q8CHP6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Phc3Q8CHP6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Phc3Q8CHP6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
Phc3Q8CHP6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
Phc3Q8CHP6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.6■■■□□ 2.01
Phc3Q8CHP6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Phc3Q8CHP6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Phc3Q8CHP6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Phc3Q8CHP6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Phc3Q8CHP6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.57■■■□□ 2
Phc3Q8CHP6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Phc3Q8CHP6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
Phc3Q8CHP6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Phc3Q8CHP6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Phc3Q8CHP6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Phc3Q8CHP6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.51■■□□□ 1.99
Phc3Q8CHP6 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.51■■□□□ 1.99
Phc3Q8CHP6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Phc3Q8CHP6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Phc3Q8CHP6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Phc3Q8CHP6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Phc3Q8CHP6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Phc3Q8CHP6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Phc3Q8CHP6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Phc3Q8CHP6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.48■■□□□ 1.99
Phc3Q8CHP6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Phc3Q8CHP6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Phc3Q8CHP6 Mipep-204ENSMUST00000225043 1548 ntBASIC27.46■■□□□ 1.99
Phc3Q8CHP6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Phc3Q8CHP6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
Phc3Q8CHP6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
Phc3Q8CHP6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Phc3Q8CHP6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Phc3Q8CHP6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Phc3Q8CHP6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Phc3Q8CHP6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Phc3Q8CHP6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Phc3Q8CHP6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Phc3Q8CHP6 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.38■■□□□ 1.97
Phc3Q8CHP6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Phc3Q8CHP6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Phc3Q8CHP6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Phc3Q8CHP6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Phc3Q8CHP6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Phc3Q8CHP6 Amer2-203ENSMUST00000225247 2662 ntBASIC27.33■■□□□ 1.97
Phc3Q8CHP6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Phc3Q8CHP6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Phc3Q8CHP6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Phc3Q8CHP6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.29■■□□□ 1.96
Phc3Q8CHP6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Phc3Q8CHP6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Phc3Q8CHP6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.22■■□□□ 1.95
Phc3Q8CHP6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
Phc3Q8CHP6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
Phc3Q8CHP6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Phc3Q8CHP6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Phc3Q8CHP6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Phc3Q8CHP6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Phc3Q8CHP6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Phc3Q8CHP6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.17■■□□□ 1.94
Phc3Q8CHP6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Phc3Q8CHP6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
Phc3Q8CHP6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.15■■□□□ 1.94
Phc3Q8CHP6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Phc3Q8CHP6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Phc3Q8CHP6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Phc3Q8CHP6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
Phc3Q8CHP6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Phc3Q8CHP6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Phc3Q8CHP6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.07■■□□□ 1.92
Phc3Q8CHP6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Phc3Q8CHP6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Phc3Q8CHP6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Phc3Q8CHP6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
Phc3Q8CHP6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms