Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Rbm28Q8CGC6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rbm28Q8CGC6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Rbm28Q8CGC6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Rbm28Q8CGC6 Gm16148-201ENSMUST00000119653 893 ntBASIC31.06■■■□□ 2.56
Rbm28Q8CGC6 Peli2-204ENSMUST00000226513 1320 ntBASIC31.05■■■□□ 2.56
Rbm28Q8CGC6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
Rbm28Q8CGC6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Rbm28Q8CGC6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
Rbm28Q8CGC6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.01■■■□□ 2.55
Rbm28Q8CGC6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Rbm28Q8CGC6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31■■■□□ 2.55
Rbm28Q8CGC6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31■■■□□ 2.55
Rbm28Q8CGC6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Rbm28Q8CGC6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Rbm28Q8CGC6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.95■■■□□ 2.55
Rbm28Q8CGC6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Rbm28Q8CGC6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Rbm28Q8CGC6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Rbm28Q8CGC6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Rbm28Q8CGC6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
Rbm28Q8CGC6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rbm28Q8CGC6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Rbm28Q8CGC6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
Rbm28Q8CGC6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Rbm28Q8CGC6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Rbm28Q8CGC6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Rbm28Q8CGC6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
Rbm28Q8CGC6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Rbm28Q8CGC6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Rbm28Q8CGC6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Rbm28Q8CGC6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.75■■■□□ 2.51
Rbm28Q8CGC6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Rbm28Q8CGC6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Rbm28Q8CGC6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Rbm28Q8CGC6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.72■■■□□ 2.51
Rbm28Q8CGC6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rbm28Q8CGC6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
Rbm28Q8CGC6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Rbm28Q8CGC6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Rbm28Q8CGC6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Rbm28Q8CGC6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Rbm28Q8CGC6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30.65■■■□□ 2.5
Rbm28Q8CGC6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.63■■■□□ 2.49
Rbm28Q8CGC6 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.63■■■□□ 2.49
Rbm28Q8CGC6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Rbm28Q8CGC6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Rbm28Q8CGC6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Rbm28Q8CGC6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC30.56■■■□□ 2.48
Rbm28Q8CGC6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.55■■■□□ 2.48
Rbm28Q8CGC6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
Rbm28Q8CGC6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Rbm28Q8CGC6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Rbm28Q8CGC6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Rbm28Q8CGC6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Rbm28Q8CGC6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Rbm28Q8CGC6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Rbm28Q8CGC6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.43■■■□□ 2.46
Rbm28Q8CGC6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Rbm28Q8CGC6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
Rbm28Q8CGC6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Rbm28Q8CGC6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Rbm28Q8CGC6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Rbm28Q8CGC6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Rbm28Q8CGC6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
Rbm28Q8CGC6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Rbm28Q8CGC6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC30.35■■■□□ 2.45
Rbm28Q8CGC6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Rbm28Q8CGC6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.32■■■□□ 2.44
Rbm28Q8CGC6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Rbm28Q8CGC6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30.31■■■□□ 2.44
Rbm28Q8CGC6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Rbm28Q8CGC6 Gm45855-201ENSMUST00000212546 880 ntBASIC30.3■■■□□ 2.44
Rbm28Q8CGC6 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.29■■■□□ 2.44
Rbm28Q8CGC6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC30.29■■■□□ 2.44
Rbm28Q8CGC6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Rbm28Q8CGC6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.27■■■□□ 2.44
Rbm28Q8CGC6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.26■■■□□ 2.44
Rbm28Q8CGC6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rbm28Q8CGC6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rbm28Q8CGC6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rbm28Q8CGC6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Rbm28Q8CGC6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
Rbm28Q8CGC6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Rbm28Q8CGC6 Gm9397-201ENSMUST00000200125 605 ntBASIC30.18■■■□□ 2.42
Rbm28Q8CGC6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Rbm28Q8CGC6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Rbm28Q8CGC6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Rbm28Q8CGC6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
Rbm28Q8CGC6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Rbm28Q8CGC6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Rbm28Q8CGC6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Rbm28Q8CGC6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Rbm28Q8CGC6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Rbm28Q8CGC6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Rbm28Q8CGC6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.12■■■□□ 2.41
Rbm28Q8CGC6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Rbm28Q8CGC6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC30.11■■■□□ 2.41
Rbm28Q8CGC6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Rbm28Q8CGC6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.09■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms