Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Slc46a2Q8CA03 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Slc46a2Q8CA03 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.07■■□□□ 1.6
Slc46a2Q8CA03 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Slc46a2Q8CA03 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Slc46a2Q8CA03 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Slc46a2Q8CA03 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Slc46a2Q8CA03 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.03■■□□□ 1.6
Slc46a2Q8CA03 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Slc46a2Q8CA03 Rab21-202ENSMUST00000218831 843 ntBASIC25.02■■□□□ 1.6
Slc46a2Q8CA03 Zxda-201ENSMUST00000117281 2621 ntBASIC25.02■■□□□ 1.6
Slc46a2Q8CA03 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Slc46a2Q8CA03 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Slc46a2Q8CA03 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Slc46a2Q8CA03 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Slc46a2Q8CA03 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Slc46a2Q8CA03 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.98■■□□□ 1.59
Slc46a2Q8CA03 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Slc46a2Q8CA03 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Slc46a2Q8CA03 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Slc46a2Q8CA03 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Slc46a2Q8CA03 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Slc46a2Q8CA03 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Slc46a2Q8CA03 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Slc46a2Q8CA03 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Slc46a2Q8CA03 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Slc46a2Q8CA03 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Slc46a2Q8CA03 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Slc46a2Q8CA03 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Slc46a2Q8CA03 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Slc46a2Q8CA03 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
Slc46a2Q8CA03 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Slc46a2Q8CA03 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Slc46a2Q8CA03 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.87■■□□□ 1.57
Slc46a2Q8CA03 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Slc46a2Q8CA03 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Slc46a2Q8CA03 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Slc46a2Q8CA03 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Slc46a2Q8CA03 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Slc46a2Q8CA03 Mipep-204ENSMUST00000225043 1548 ntBASIC24.83■■□□□ 1.57
Slc46a2Q8CA03 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Slc46a2Q8CA03 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Slc46a2Q8CA03 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Slc46a2Q8CA03 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Slc46a2Q8CA03 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Slc46a2Q8CA03 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
Slc46a2Q8CA03 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Slc46a2Q8CA03 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.79■■□□□ 1.56
Slc46a2Q8CA03 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Slc46a2Q8CA03 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Slc46a2Q8CA03 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Slc46a2Q8CA03 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Slc46a2Q8CA03 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Slc46a2Q8CA03 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.77■■□□□ 1.56
Slc46a2Q8CA03 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.76■■□□□ 1.55
Slc46a2Q8CA03 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Slc46a2Q8CA03 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Slc46a2Q8CA03 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Slc46a2Q8CA03 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
Slc46a2Q8CA03 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Slc46a2Q8CA03 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Slc46a2Q8CA03 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Slc46a2Q8CA03 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Slc46a2Q8CA03 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Slc46a2Q8CA03 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.71■■□□□ 1.55
Slc46a2Q8CA03 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.71■■□□□ 1.55
Slc46a2Q8CA03 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Slc46a2Q8CA03 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Slc46a2Q8CA03 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.65■■□□□ 1.54
Slc46a2Q8CA03 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Slc46a2Q8CA03 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Slc46a2Q8CA03 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Slc46a2Q8CA03 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Slc46a2Q8CA03 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
Slc46a2Q8CA03 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Slc46a2Q8CA03 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Slc46a2Q8CA03 Gm25262-201ENSMUST00000174934 133 ntBASIC24.56■■□□□ 1.52
Slc46a2Q8CA03 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Slc46a2Q8CA03 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
Slc46a2Q8CA03 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Slc46a2Q8CA03 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Slc46a2Q8CA03 Amer2-203ENSMUST00000225247 2662 ntBASIC24.52■■□□□ 1.52
Slc46a2Q8CA03 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Slc46a2Q8CA03 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Slc46a2Q8CA03 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Slc46a2Q8CA03 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.47■■□□□ 1.51
Slc46a2Q8CA03 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Slc46a2Q8CA03 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Slc46a2Q8CA03 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Slc46a2Q8CA03 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Slc46a2Q8CA03 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Slc46a2Q8CA03 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Slc46a2Q8CA03 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Slc46a2Q8CA03 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Slc46a2Q8CA03 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
Slc46a2Q8CA03 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Slc46a2Q8CA03 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Slc46a2Q8CA03 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Slc46a2Q8CA03 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Slc46a2Q8CA03 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms