Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Tsen54Q8C2A2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tsen54Q8C2A2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tsen54Q8C2A2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tsen54Q8C2A2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tsen54Q8C2A2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tsen54Q8C2A2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tsen54Q8C2A2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tsen54Q8C2A2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
Tsen54Q8C2A2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tsen54Q8C2A2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tsen54Q8C2A2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.39■■□□□ 1.01
Tsen54Q8C2A2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tsen54Q8C2A2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tsen54Q8C2A2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tsen54Q8C2A2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tsen54Q8C2A2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Tsen54Q8C2A2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tsen54Q8C2A2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Tsen54Q8C2A2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tsen54Q8C2A2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.33■■□□□ 1.01
Tsen54Q8C2A2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Tsen54Q8C2A2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Tsen54Q8C2A2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tsen54Q8C2A2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.32■■□□□ 1
Tsen54Q8C2A2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
Tsen54Q8C2A2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tsen54Q8C2A2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tsen54Q8C2A2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Tsen54Q8C2A2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tsen54Q8C2A2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Tsen54Q8C2A2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tsen54Q8C2A2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tsen54Q8C2A2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tsen54Q8C2A2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.22■□□□□ 0.99
Tsen54Q8C2A2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tsen54Q8C2A2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tsen54Q8C2A2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tsen54Q8C2A2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tsen54Q8C2A2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tsen54Q8C2A2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tsen54Q8C2A2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tsen54Q8C2A2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tsen54Q8C2A2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.19■□□□□ 0.98
Tsen54Q8C2A2 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.19■□□□□ 0.98
Tsen54Q8C2A2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tsen54Q8C2A2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tsen54Q8C2A2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tsen54Q8C2A2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tsen54Q8C2A2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tsen54Q8C2A2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.17■□□□□ 0.98
Tsen54Q8C2A2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tsen54Q8C2A2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tsen54Q8C2A2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tsen54Q8C2A2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Tsen54Q8C2A2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Tsen54Q8C2A2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Tsen54Q8C2A2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tsen54Q8C2A2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tsen54Q8C2A2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tsen54Q8C2A2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tsen54Q8C2A2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Tsen54Q8C2A2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tsen54Q8C2A2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.07■□□□□ 0.96
Tsen54Q8C2A2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tsen54Q8C2A2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tsen54Q8C2A2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Tsen54Q8C2A2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tsen54Q8C2A2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tsen54Q8C2A2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tsen54Q8C2A2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.02■□□□□ 0.96
Tsen54Q8C2A2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tsen54Q8C2A2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Tsen54Q8C2A2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tsen54Q8C2A2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tsen54Q8C2A2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tsen54Q8C2A2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tsen54Q8C2A2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tsen54Q8C2A2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Tsen54Q8C2A2 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.97■□□□□ 0.95
Tsen54Q8C2A2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tsen54Q8C2A2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tsen54Q8C2A2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tsen54Q8C2A2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tsen54Q8C2A2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.94■□□□□ 0.94
Tsen54Q8C2A2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tsen54Q8C2A2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tsen54Q8C2A2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tsen54Q8C2A2 Amer2-203ENSMUST00000225247 2662 ntBASIC20.93■□□□□ 0.94
Tsen54Q8C2A2 Gm26115-201ENSMUST00000175605 87 ntBASIC20.93■□□□□ 0.94
Tsen54Q8C2A2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tsen54Q8C2A2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tsen54Q8C2A2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tsen54Q8C2A2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tsen54Q8C2A2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tsen54Q8C2A2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tsen54Q8C2A2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tsen54Q8C2A2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tsen54Q8C2A2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Tsen54Q8C2A2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms