Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lsm11Q8BUV6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lsm11Q8BUV6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lsm11Q8BUV6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lsm11Q8BUV6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Lsm11Q8BUV6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lsm11Q8BUV6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lsm11Q8BUV6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Lsm11Q8BUV6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lsm11Q8BUV6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lsm11Q8BUV6 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.08■■□□□ 1.12
Lsm11Q8BUV6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Lsm11Q8BUV6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Lsm11Q8BUV6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lsm11Q8BUV6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lsm11Q8BUV6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Lsm11Q8BUV6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lsm11Q8BUV6 Zxda-201ENSMUST00000117281 2621 ntBASIC22.03■■□□□ 1.12
Lsm11Q8BUV6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lsm11Q8BUV6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Lsm11Q8BUV6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Lsm11Q8BUV6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lsm11Q8BUV6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22■■□□□ 1.11
Lsm11Q8BUV6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.99■■□□□ 1.11
Lsm11Q8BUV6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Lsm11Q8BUV6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Lsm11Q8BUV6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.97■■□□□ 1.11
Lsm11Q8BUV6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lsm11Q8BUV6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Lsm11Q8BUV6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Lsm11Q8BUV6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Lsm11Q8BUV6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lsm11Q8BUV6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lsm11Q8BUV6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lsm11Q8BUV6 Mipep-204ENSMUST00000225043 1548 ntBASIC21.92■■□□□ 1.1
Lsm11Q8BUV6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lsm11Q8BUV6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lsm11Q8BUV6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lsm11Q8BUV6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Lsm11Q8BUV6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lsm11Q8BUV6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lsm11Q8BUV6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lsm11Q8BUV6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lsm11Q8BUV6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Lsm11Q8BUV6 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.87■■□□□ 1.09
Lsm11Q8BUV6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lsm11Q8BUV6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lsm11Q8BUV6 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.87■■□□□ 1.09
Lsm11Q8BUV6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lsm11Q8BUV6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lsm11Q8BUV6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lsm11Q8BUV6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.85■■□□□ 1.09
Lsm11Q8BUV6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
Lsm11Q8BUV6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Lsm11Q8BUV6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Lsm11Q8BUV6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Lsm11Q8BUV6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lsm11Q8BUV6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm11Q8BUV6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm11Q8BUV6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm11Q8BUV6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm11Q8BUV6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm11Q8BUV6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.78■■□□□ 1.08
Lsm11Q8BUV6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lsm11Q8BUV6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Lsm11Q8BUV6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm11Q8BUV6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm11Q8BUV6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Lsm11Q8BUV6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm11Q8BUV6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm11Q8BUV6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm11Q8BUV6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsm11Q8BUV6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lsm11Q8BUV6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lsm11Q8BUV6 Amer2-203ENSMUST00000225247 2662 ntBASIC21.69■■□□□ 1.06
Lsm11Q8BUV6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm11Q8BUV6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm11Q8BUV6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm11Q8BUV6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Lsm11Q8BUV6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm11Q8BUV6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Lsm11Q8BUV6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Lsm11Q8BUV6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lsm11Q8BUV6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Lsm11Q8BUV6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Lsm11Q8BUV6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Lsm11Q8BUV6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm11Q8BUV6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm11Q8BUV6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm11Q8BUV6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Lsm11Q8BUV6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lsm11Q8BUV6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lsm11Q8BUV6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Lsm11Q8BUV6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm11Q8BUV6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Lsm11Q8BUV6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm11Q8BUV6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm11Q8BUV6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm11Q8BUV6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lsm11Q8BUV6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms