Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lsm11Q8BUV6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lsm11Q8BUV6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Lsm11Q8BUV6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lsm11Q8BUV6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Lsm11Q8BUV6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lsm11Q8BUV6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lsm11Q8BUV6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Lsm11Q8BUV6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lsm11Q8BUV6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lsm11Q8BUV6 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.08■■□□□ 1.12
Lsm11Q8BUV6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Lsm11Q8BUV6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Lsm11Q8BUV6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lsm11Q8BUV6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lsm11Q8BUV6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Lsm11Q8BUV6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lsm11Q8BUV6 Zxda-201ENSMUST00000117281 2621 ntBASIC22.03■■□□□ 1.12
Lsm11Q8BUV6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lsm11Q8BUV6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Lsm11Q8BUV6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Lsm11Q8BUV6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lsm11Q8BUV6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22■■□□□ 1.11
Lsm11Q8BUV6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.99■■□□□ 1.11
Lsm11Q8BUV6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Lsm11Q8BUV6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Lsm11Q8BUV6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.97■■□□□ 1.11
Lsm11Q8BUV6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lsm11Q8BUV6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Lsm11Q8BUV6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Lsm11Q8BUV6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Lsm11Q8BUV6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lsm11Q8BUV6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lsm11Q8BUV6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lsm11Q8BUV6 Mipep-204ENSMUST00000225043 1548 ntBASIC21.92■■□□□ 1.1
Lsm11Q8BUV6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lsm11Q8BUV6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lsm11Q8BUV6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lsm11Q8BUV6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Lsm11Q8BUV6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lsm11Q8BUV6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lsm11Q8BUV6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lsm11Q8BUV6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lsm11Q8BUV6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Lsm11Q8BUV6 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.87■■□□□ 1.09
Lsm11Q8BUV6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lsm11Q8BUV6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lsm11Q8BUV6 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.87■■□□□ 1.09
Lsm11Q8BUV6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lsm11Q8BUV6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lsm11Q8BUV6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lsm11Q8BUV6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.85■■□□□ 1.09
Lsm11Q8BUV6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
Lsm11Q8BUV6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Lsm11Q8BUV6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Lsm11Q8BUV6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Lsm11Q8BUV6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lsm11Q8BUV6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm11Q8BUV6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Lsm11Q8BUV6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm11Q8BUV6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm11Q8BUV6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm11Q8BUV6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.78■■□□□ 1.08
Lsm11Q8BUV6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lsm11Q8BUV6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Lsm11Q8BUV6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm11Q8BUV6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm11Q8BUV6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Lsm11Q8BUV6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm11Q8BUV6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm11Q8BUV6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm11Q8BUV6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsm11Q8BUV6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lsm11Q8BUV6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lsm11Q8BUV6 Amer2-203ENSMUST00000225247 2662 ntBASIC21.69■■□□□ 1.06
Lsm11Q8BUV6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm11Q8BUV6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm11Q8BUV6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm11Q8BUV6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Lsm11Q8BUV6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm11Q8BUV6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Lsm11Q8BUV6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Lsm11Q8BUV6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lsm11Q8BUV6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Lsm11Q8BUV6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Lsm11Q8BUV6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Lsm11Q8BUV6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm11Q8BUV6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm11Q8BUV6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm11Q8BUV6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Lsm11Q8BUV6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lsm11Q8BUV6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lsm11Q8BUV6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Lsm11Q8BUV6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm11Q8BUV6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Lsm11Q8BUV6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm11Q8BUV6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm11Q8BUV6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm11Q8BUV6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lsm11Q8BUV6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms