Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smco3Q8BQM7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smco3Q8BQM7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smco3Q8BQM7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smco3Q8BQM7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smco3Q8BQM7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.05■□□□□ 0.96
Smco3Q8BQM7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smco3Q8BQM7 Zxda-201ENSMUST00000117281 2621 ntBASIC21.05■□□□□ 0.96
Smco3Q8BQM7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smco3Q8BQM7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smco3Q8BQM7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.02■□□□□ 0.96
Smco3Q8BQM7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.02■□□□□ 0.96
Smco3Q8BQM7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.01■□□□□ 0.95
Smco3Q8BQM7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.01■□□□□ 0.95
Smco3Q8BQM7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smco3Q8BQM7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Smco3Q8BQM7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Smco3Q8BQM7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smco3Q8BQM7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smco3Q8BQM7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Smco3Q8BQM7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.98■□□□□ 0.95
Smco3Q8BQM7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smco3Q8BQM7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smco3Q8BQM7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smco3Q8BQM7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smco3Q8BQM7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smco3Q8BQM7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smco3Q8BQM7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smco3Q8BQM7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Smco3Q8BQM7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smco3Q8BQM7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smco3Q8BQM7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smco3Q8BQM7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Smco3Q8BQM7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smco3Q8BQM7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smco3Q8BQM7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smco3Q8BQM7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smco3Q8BQM7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Smco3Q8BQM7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smco3Q8BQM7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smco3Q8BQM7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.87■□□□□ 0.93
Smco3Q8BQM7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smco3Q8BQM7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smco3Q8BQM7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smco3Q8BQM7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smco3Q8BQM7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smco3Q8BQM7 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.85■□□□□ 0.93
Smco3Q8BQM7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.84■□□□□ 0.93
Smco3Q8BQM7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Smco3Q8BQM7 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.82■□□□□ 0.92
Smco3Q8BQM7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smco3Q8BQM7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smco3Q8BQM7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smco3Q8BQM7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smco3Q8BQM7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smco3Q8BQM7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.77■□□□□ 0.92
Smco3Q8BQM7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.77■□□□□ 0.92
Smco3Q8BQM7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smco3Q8BQM7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Smco3Q8BQM7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Smco3Q8BQM7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smco3Q8BQM7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smco3Q8BQM7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Smco3Q8BQM7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Smco3Q8BQM7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smco3Q8BQM7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smco3Q8BQM7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smco3Q8BQM7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smco3Q8BQM7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smco3Q8BQM7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Smco3Q8BQM7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smco3Q8BQM7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Smco3Q8BQM7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smco3Q8BQM7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smco3Q8BQM7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Smco3Q8BQM7 Rab21-202ENSMUST00000218831 843 ntBASIC20.68■□□□□ 0.9
Smco3Q8BQM7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smco3Q8BQM7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smco3Q8BQM7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smco3Q8BQM7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smco3Q8BQM7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smco3Q8BQM7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smco3Q8BQM7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Smco3Q8BQM7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smco3Q8BQM7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.66■□□□□ 0.9
Smco3Q8BQM7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smco3Q8BQM7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smco3Q8BQM7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Smco3Q8BQM7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Smco3Q8BQM7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smco3Q8BQM7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Smco3Q8BQM7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smco3Q8BQM7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smco3Q8BQM7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smco3Q8BQM7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smco3Q8BQM7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smco3Q8BQM7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smco3Q8BQM7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smco3Q8BQM7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smco3Q8BQM7 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms