Protein–RNA interactions for Protein: Q8BI17

Sh2d7, SH2 domain-containing protein 7, mousemouse

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d7Q8BI17 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh2d7Q8BI17 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Sh2d7Q8BI17 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh2d7Q8BI17 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh2d7Q8BI17 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.16■■□□□ 1.3
Sh2d7Q8BI17 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Sh2d7Q8BI17 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Sh2d7Q8BI17 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sh2d7Q8BI17 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sh2d7Q8BI17 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.09■■□□□ 1.29
Sh2d7Q8BI17 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sh2d7Q8BI17 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Sh2d7Q8BI17 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sh2d7Q8BI17 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
Sh2d7Q8BI17 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sh2d7Q8BI17 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Sh2d7Q8BI17 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Sh2d7Q8BI17 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Sh2d7Q8BI17 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sh2d7Q8BI17 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Sh2d7Q8BI17 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sh2d7Q8BI17 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Sh2d7Q8BI17 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
Sh2d7Q8BI17 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.99■■□□□ 1.27
Sh2d7Q8BI17 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.99■■□□□ 1.27
Sh2d7Q8BI17 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Sh2d7Q8BI17 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sh2d7Q8BI17 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Sh2d7Q8BI17 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sh2d7Q8BI17 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sh2d7Q8BI17 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Sh2d7Q8BI17 Peli2-204ENSMUST00000226513 1320 ntBASIC22.94■■□□□ 1.26
Sh2d7Q8BI17 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.94■■□□□ 1.26
Sh2d7Q8BI17 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sh2d7Q8BI17 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.89■■□□□ 1.25
Sh2d7Q8BI17 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Sh2d7Q8BI17 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Sh2d7Q8BI17 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sh2d7Q8BI17 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Sh2d7Q8BI17 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sh2d7Q8BI17 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Sh2d7Q8BI17 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.84■■□□□ 1.25
Sh2d7Q8BI17 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sh2d7Q8BI17 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Sh2d7Q8BI17 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Sh2d7Q8BI17 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.82■■□□□ 1.24
Sh2d7Q8BI17 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Sh2d7Q8BI17 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Sh2d7Q8BI17 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Sh2d7Q8BI17 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.81■■□□□ 1.24
Sh2d7Q8BI17 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sh2d7Q8BI17 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sh2d7Q8BI17 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sh2d7Q8BI17 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sh2d7Q8BI17 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sh2d7Q8BI17 Gm16148-201ENSMUST00000119653 893 ntBASIC22.77■■□□□ 1.24
Sh2d7Q8BI17 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sh2d7Q8BI17 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
Sh2d7Q8BI17 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Sh2d7Q8BI17 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sh2d7Q8BI17 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sh2d7Q8BI17 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Sh2d7Q8BI17 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Sh2d7Q8BI17 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Sh2d7Q8BI17 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sh2d7Q8BI17 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sh2d7Q8BI17 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.65■■□□□ 1.22
Sh2d7Q8BI17 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.64■■□□□ 1.22
Sh2d7Q8BI17 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.62■■□□□ 1.21
Sh2d7Q8BI17 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Sh2d7Q8BI17 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh2d7Q8BI17 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sh2d7Q8BI17 Zfp131-205ENSMUST00000223812 663 ntBASIC22.6■■□□□ 1.21
Sh2d7Q8BI17 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sh2d7Q8BI17 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sh2d7Q8BI17 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Sh2d7Q8BI17 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Sh2d7Q8BI17 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh2d7Q8BI17 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.55■■□□□ 1.2
Sh2d7Q8BI17 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh2d7Q8BI17 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh2d7Q8BI17 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
Sh2d7Q8BI17 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Sh2d7Q8BI17 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.52■■□□□ 1.2
Sh2d7Q8BI17 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Sh2d7Q8BI17 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
Sh2d7Q8BI17 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh2d7Q8BI17 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.49■■□□□ 1.19
Sh2d7Q8BI17 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sh2d7Q8BI17 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sh2d7Q8BI17 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sh2d7Q8BI17 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sh2d7Q8BI17 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.47■■□□□ 1.19
Sh2d7Q8BI17 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Sh2d7Q8BI17 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh2d7Q8BI17 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh2d7Q8BI17 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Sh2d7Q8BI17 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh2d7Q8BI17 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.45■■□□□ 1.18
Sh2d7Q8BI17 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms