Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Atpaf1Q811I0 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.29■■□□□ 1
Atpaf1Q811I0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atpaf1Q811I0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Atpaf1Q811I0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Atpaf1Q811I0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Atpaf1Q811I0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atpaf1Q811I0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Atpaf1Q811I0 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.23■□□□□ 0.99
Atpaf1Q811I0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Atpaf1Q811I0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Atpaf1Q811I0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.22■□□□□ 0.99
Atpaf1Q811I0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atpaf1Q811I0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atpaf1Q811I0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atpaf1Q811I0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atpaf1Q811I0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atpaf1Q811I0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Atpaf1Q811I0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atpaf1Q811I0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Atpaf1Q811I0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atpaf1Q811I0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Atpaf1Q811I0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Atpaf1Q811I0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atpaf1Q811I0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atpaf1Q811I0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atpaf1Q811I0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atpaf1Q811I0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Atpaf1Q811I0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atpaf1Q811I0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.08■□□□□ 0.96
Atpaf1Q811I0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atpaf1Q811I0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atpaf1Q811I0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Atpaf1Q811I0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Atpaf1Q811I0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Atpaf1Q811I0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Atpaf1Q811I0 Amer2-203ENSMUST00000225247 2662 ntBASIC21.01■□□□□ 0.95
Atpaf1Q811I0 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.01■□□□□ 0.95
Atpaf1Q811I0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Atpaf1Q811I0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atpaf1Q811I0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atpaf1Q811I0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Atpaf1Q811I0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Atpaf1Q811I0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Atpaf1Q811I0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Atpaf1Q811I0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Atpaf1Q811I0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atpaf1Q811I0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.93■□□□□ 0.94
Atpaf1Q811I0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atpaf1Q811I0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Atpaf1Q811I0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atpaf1Q811I0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.92■□□□□ 0.94
Atpaf1Q811I0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atpaf1Q811I0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atpaf1Q811I0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Atpaf1Q811I0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atpaf1Q811I0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atpaf1Q811I0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atpaf1Q811I0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atpaf1Q811I0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Atpaf1Q811I0 Gm27325-201ENSMUST00000175467 74 ntBASIC20.89■□□□□ 0.93
Atpaf1Q811I0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.89■□□□□ 0.93
Atpaf1Q811I0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atpaf1Q811I0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atpaf1Q811I0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atpaf1Q811I0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atpaf1Q811I0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Atpaf1Q811I0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atpaf1Q811I0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atpaf1Q811I0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atpaf1Q811I0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atpaf1Q811I0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atpaf1Q811I0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atpaf1Q811I0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Atpaf1Q811I0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Atpaf1Q811I0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atpaf1Q811I0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.78■□□□□ 0.92
Atpaf1Q811I0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atpaf1Q811I0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.77■□□□□ 0.91
Atpaf1Q811I0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Atpaf1Q811I0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Atpaf1Q811I0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atpaf1Q811I0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atpaf1Q811I0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.71■□□□□ 0.91
Atpaf1Q811I0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Atpaf1Q811I0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Atpaf1Q811I0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atpaf1Q811I0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atpaf1Q811I0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.68■□□□□ 0.9
Atpaf1Q811I0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atpaf1Q811I0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atpaf1Q811I0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atpaf1Q811I0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atpaf1Q811I0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atpaf1Q811I0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Atpaf1Q811I0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Atpaf1Q811I0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atpaf1Q811I0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atpaf1Q811I0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Atpaf1Q811I0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms