Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Trnp1Q80ZI1 Gm45855-201ENSMUST00000212546 880 ntBASIC31.1■■■□□ 2.57
Trnp1Q80ZI1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Trnp1Q80ZI1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Trnp1Q80ZI1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.04■■■□□ 2.56
Trnp1Q80ZI1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Trnp1Q80ZI1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31■■■□□ 2.55
Trnp1Q80ZI1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
Trnp1Q80ZI1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Trnp1Q80ZI1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Trnp1Q80ZI1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Trnp1Q80ZI1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Trnp1Q80ZI1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Trnp1Q80ZI1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.83■■■□□ 2.53
Trnp1Q80ZI1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
Trnp1Q80ZI1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
Trnp1Q80ZI1 Gm9397-201ENSMUST00000200125 605 ntBASIC30.83■■■□□ 2.53
Trnp1Q80ZI1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Trnp1Q80ZI1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Trnp1Q80ZI1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Trnp1Q80ZI1 Mipep-204ENSMUST00000225043 1548 ntBASIC30.82■■■□□ 2.52
Trnp1Q80ZI1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Trnp1Q80ZI1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Trnp1Q80ZI1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Trnp1Q80ZI1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Trnp1Q80ZI1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Trnp1Q80ZI1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Trnp1Q80ZI1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
Trnp1Q80ZI1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Trnp1Q80ZI1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Trnp1Q80ZI1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.7■■■□□ 2.51
Trnp1Q80ZI1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Trnp1Q80ZI1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.69■■■□□ 2.5
Trnp1Q80ZI1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
Trnp1Q80ZI1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Trnp1Q80ZI1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Trnp1Q80ZI1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Trnp1Q80ZI1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.66■■■□□ 2.5
Trnp1Q80ZI1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Trnp1Q80ZI1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
Trnp1Q80ZI1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Trnp1Q80ZI1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Trnp1Q80ZI1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Trnp1Q80ZI1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.63■■■□□ 2.49
Trnp1Q80ZI1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.61■■■□□ 2.49
Trnp1Q80ZI1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Trnp1Q80ZI1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.61■■■□□ 2.49
Trnp1Q80ZI1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Trnp1Q80ZI1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Trnp1Q80ZI1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Trnp1Q80ZI1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.55■■■□□ 2.48
Trnp1Q80ZI1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.54■■■□□ 2.48
Trnp1Q80ZI1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Trnp1Q80ZI1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Trnp1Q80ZI1 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.51■■■□□ 2.47
Trnp1Q80ZI1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Trnp1Q80ZI1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Trnp1Q80ZI1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.49■■■□□ 2.47
Trnp1Q80ZI1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
Trnp1Q80ZI1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.44■■■□□ 2.46
Trnp1Q80ZI1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Trnp1Q80ZI1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.42■■■□□ 2.46
Trnp1Q80ZI1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.41■■■□□ 2.46
Trnp1Q80ZI1 Gm24970-201ENSMUST00000175582 82 ntBASIC30.38■■■□□ 2.45
Trnp1Q80ZI1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.33■■■□□ 2.45
Trnp1Q80ZI1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Trnp1Q80ZI1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Trnp1Q80ZI1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.32■■■□□ 2.44
Trnp1Q80ZI1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
Trnp1Q80ZI1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.29■■■□□ 2.44
Trnp1Q80ZI1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Trnp1Q80ZI1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.27■■■□□ 2.44
Trnp1Q80ZI1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Trnp1Q80ZI1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Trnp1Q80ZI1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Trnp1Q80ZI1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
Trnp1Q80ZI1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
Trnp1Q80ZI1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.15■■■□□ 2.42
Trnp1Q80ZI1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Trnp1Q80ZI1 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.14■■■□□ 2.42
Trnp1Q80ZI1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
Trnp1Q80ZI1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Trnp1Q80ZI1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.12■■■□□ 2.41
Trnp1Q80ZI1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Trnp1Q80ZI1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Trnp1Q80ZI1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
Trnp1Q80ZI1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.1■■■□□ 2.41
Trnp1Q80ZI1 Gm8503-201ENSMUST00000118131 455 ntBASIC30.09■■■□□ 2.41
Trnp1Q80ZI1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Trnp1Q80ZI1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Trnp1Q80ZI1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Trnp1Q80ZI1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Trnp1Q80ZI1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
Trnp1Q80ZI1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Trnp1Q80ZI1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Trnp1Q80ZI1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC30.01■■■□□ 2.39
Trnp1Q80ZI1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Trnp1Q80ZI1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Trnp1Q80ZI1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Trnp1Q80ZI1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.99■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms