Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Zc3hc1Q80YV2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Zc3hc1Q80YV2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Zc3hc1Q80YV2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Zc3hc1Q80YV2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Zc3hc1Q80YV2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Zc3hc1Q80YV2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Zc3hc1Q80YV2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Zc3hc1Q80YV2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Zc3hc1Q80YV2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Zc3hc1Q80YV2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Zc3hc1Q80YV2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Zc3hc1Q80YV2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Zc3hc1Q80YV2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Zc3hc1Q80YV2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Zc3hc1Q80YV2 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.66■■□□□ 1.38
Zc3hc1Q80YV2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Zc3hc1Q80YV2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Zc3hc1Q80YV2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.63■■□□□ 1.37
Zc3hc1Q80YV2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Zc3hc1Q80YV2 Mipep-204ENSMUST00000225043 1548 ntBASIC23.62■■□□□ 1.37
Zc3hc1Q80YV2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.61■■□□□ 1.37
Zc3hc1Q80YV2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Zc3hc1Q80YV2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Zc3hc1Q80YV2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Zc3hc1Q80YV2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Zc3hc1Q80YV2 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.58■■□□□ 1.37
Zc3hc1Q80YV2 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.57■■□□□ 1.36
Zc3hc1Q80YV2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Zc3hc1Q80YV2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Zc3hc1Q80YV2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Zc3hc1Q80YV2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Zc3hc1Q80YV2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.54■■□□□ 1.36
Zc3hc1Q80YV2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Zc3hc1Q80YV2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Zc3hc1Q80YV2 Zxda-201ENSMUST00000117281 2621 ntBASIC23.52■■□□□ 1.36
Zc3hc1Q80YV2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Zc3hc1Q80YV2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Zc3hc1Q80YV2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Zc3hc1Q80YV2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Zc3hc1Q80YV2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Zc3hc1Q80YV2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Zc3hc1Q80YV2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Zc3hc1Q80YV2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Zc3hc1Q80YV2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Zc3hc1Q80YV2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Zc3hc1Q80YV2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.47■■□□□ 1.35
Zc3hc1Q80YV2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Zc3hc1Q80YV2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Zc3hc1Q80YV2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Zc3hc1Q80YV2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Zc3hc1Q80YV2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Zc3hc1Q80YV2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
Zc3hc1Q80YV2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Zc3hc1Q80YV2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Zc3hc1Q80YV2 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.37■■□□□ 1.33
Zc3hc1Q80YV2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Zc3hc1Q80YV2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Zc3hc1Q80YV2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Zc3hc1Q80YV2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Zc3hc1Q80YV2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Zc3hc1Q80YV2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Zc3hc1Q80YV2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.34■■□□□ 1.33
Zc3hc1Q80YV2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
Zc3hc1Q80YV2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Zc3hc1Q80YV2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Zc3hc1Q80YV2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Zc3hc1Q80YV2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Zc3hc1Q80YV2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Zc3hc1Q80YV2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Zc3hc1Q80YV2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Zc3hc1Q80YV2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Zc3hc1Q80YV2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.24■■□□□ 1.31
Zc3hc1Q80YV2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Zc3hc1Q80YV2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Zc3hc1Q80YV2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Zc3hc1Q80YV2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Zc3hc1Q80YV2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Zc3hc1Q80YV2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Zc3hc1Q80YV2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Zc3hc1Q80YV2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Zc3hc1Q80YV2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Zc3hc1Q80YV2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Zc3hc1Q80YV2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Zc3hc1Q80YV2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Zc3hc1Q80YV2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Zc3hc1Q80YV2 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.09■■□□□ 1.29
Zc3hc1Q80YV2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Zc3hc1Q80YV2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Zc3hc1Q80YV2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.28
Zc3hc1Q80YV2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.08■■□□□ 1.28
Zc3hc1Q80YV2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Zc3hc1Q80YV2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Zc3hc1Q80YV2 Gm25262-201ENSMUST00000174934 133 ntBASIC23.06■■□□□ 1.28
Zc3hc1Q80YV2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Zc3hc1Q80YV2 Amer2-203ENSMUST00000225247 2662 ntBASIC23.06■■□□□ 1.28
Zc3hc1Q80YV2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Zc3hc1Q80YV2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Zc3hc1Q80YV2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Zc3hc1Q80YV2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms