Protein–RNA interactions for Protein: Q6ZQ93

Usp34, Ubiquitin carboxyl-terminal hydrolase 34, mousemouse

Predictions only

Length 3,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp34Q6ZQ93 Gm9397-201ENSMUST00000200125 605 ntBASIC31.56■■■□□ 2.64
Usp34Q6ZQ93 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Usp34Q6ZQ93 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Usp34Q6ZQ93 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Usp34Q6ZQ93 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC31.55■■■□□ 2.64
Usp34Q6ZQ93 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Usp34Q6ZQ93 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.52■■■□□ 2.64
Usp34Q6ZQ93 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Usp34Q6ZQ93 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Usp34Q6ZQ93 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Usp34Q6ZQ93 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.49■■■□□ 2.63
Usp34Q6ZQ93 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Usp34Q6ZQ93 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31.44■■■□□ 2.62
Usp34Q6ZQ93 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
Usp34Q6ZQ93 Peli2-204ENSMUST00000226513 1320 ntBASIC31.44■■■□□ 2.62
Usp34Q6ZQ93 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Usp34Q6ZQ93 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Usp34Q6ZQ93 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Usp34Q6ZQ93 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.38■■■□□ 2.61
Usp34Q6ZQ93 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.34■■■□□ 2.61
Usp34Q6ZQ93 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Usp34Q6ZQ93 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC31.33■■■□□ 2.61
Usp34Q6ZQ93 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.32■■■□□ 2.61
Usp34Q6ZQ93 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Usp34Q6ZQ93 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Usp34Q6ZQ93 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Usp34Q6ZQ93 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.28■■■□□ 2.6
Usp34Q6ZQ93 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Usp34Q6ZQ93 Gm8503-201ENSMUST00000118131 455 ntBASIC31.25■■■□□ 2.59
Usp34Q6ZQ93 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.25■■■□□ 2.59
Usp34Q6ZQ93 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Usp34Q6ZQ93 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31.2■■■□□ 2.58
Usp34Q6ZQ93 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Usp34Q6ZQ93 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Usp34Q6ZQ93 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Usp34Q6ZQ93 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.12■■■□□ 2.57
Usp34Q6ZQ93 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Usp34Q6ZQ93 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.12■■■□□ 2.57
Usp34Q6ZQ93 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Usp34Q6ZQ93 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC31.09■■■□□ 2.57
Usp34Q6ZQ93 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Usp34Q6ZQ93 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC31.03■■■□□ 2.56
Usp34Q6ZQ93 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Usp34Q6ZQ93 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Usp34Q6ZQ93 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Usp34Q6ZQ93 Gm24970-201ENSMUST00000175582 82 ntBASIC30.99■■■□□ 2.55
Usp34Q6ZQ93 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.91■■■□□ 2.54
Usp34Q6ZQ93 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Usp34Q6ZQ93 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Usp34Q6ZQ93 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.84■■■□□ 2.53
Usp34Q6ZQ93 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.83■■■□□ 2.53
Usp34Q6ZQ93 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
Usp34Q6ZQ93 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Usp34Q6ZQ93 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Usp34Q6ZQ93 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Usp34Q6ZQ93 Gm6821-201ENSMUST00000107540 542 ntBASIC30.81■■■□□ 2.52
Usp34Q6ZQ93 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Usp34Q6ZQ93 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
Usp34Q6ZQ93 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Usp34Q6ZQ93 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Usp34Q6ZQ93 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Usp34Q6ZQ93 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.71■■■□□ 2.51
Usp34Q6ZQ93 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.7■■■□□ 2.51
Usp34Q6ZQ93 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Usp34Q6ZQ93 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Usp34Q6ZQ93 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Usp34Q6ZQ93 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Usp34Q6ZQ93 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.66■■■□□ 2.5
Usp34Q6ZQ93 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Usp34Q6ZQ93 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Usp34Q6ZQ93 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Usp34Q6ZQ93 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Usp34Q6ZQ93 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Usp34Q6ZQ93 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Usp34Q6ZQ93 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC30.59■■■□□ 2.49
Usp34Q6ZQ93 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
Usp34Q6ZQ93 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Usp34Q6ZQ93 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
Usp34Q6ZQ93 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.54■■■□□ 2.48
Usp34Q6ZQ93 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Usp34Q6ZQ93 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Usp34Q6ZQ93 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Usp34Q6ZQ93 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Usp34Q6ZQ93 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
Usp34Q6ZQ93 Mir6538-201ENSMUST00000183713 110 ntBASIC30.41■■■□□ 2.46
Usp34Q6ZQ93 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.4■■■□□ 2.46
Usp34Q6ZQ93 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.4■■■□□ 2.46
Usp34Q6ZQ93 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
Usp34Q6ZQ93 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.39■■■□□ 2.46
Usp34Q6ZQ93 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.39■■■□□ 2.45
Usp34Q6ZQ93 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.37■■■□□ 2.45
Usp34Q6ZQ93 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Usp34Q6ZQ93 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Usp34Q6ZQ93 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
Usp34Q6ZQ93 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Usp34Q6ZQ93 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Usp34Q6ZQ93 Mipep-204ENSMUST00000225043 1548 ntBASIC30.27■■■□□ 2.44
Usp34Q6ZQ93 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Usp34Q6ZQ93 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.26■■■□□ 2.43
Usp34Q6ZQ93 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms