Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Scn10aQ6QIY3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Scn10aQ6QIY3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.43■■■□□ 2.62
Scn10aQ6QIY3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Scn10aQ6QIY3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Scn10aQ6QIY3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.39■■■□□ 2.62
Scn10aQ6QIY3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.39■■■□□ 2.62
Scn10aQ6QIY3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Scn10aQ6QIY3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
Scn10aQ6QIY3 Gm45855-201ENSMUST00000212546 880 ntBASIC31.34■■■□□ 2.61
Scn10aQ6QIY3 Mipep-204ENSMUST00000225043 1548 ntBASIC31.31■■■□□ 2.6
Scn10aQ6QIY3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Scn10aQ6QIY3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.3■■■□□ 2.6
Scn10aQ6QIY3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
Scn10aQ6QIY3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.26■■■□□ 2.59
Scn10aQ6QIY3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Scn10aQ6QIY3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Scn10aQ6QIY3 Gm9397-201ENSMUST00000200125 605 ntBASIC31.23■■■□□ 2.59
Scn10aQ6QIY3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Scn10aQ6QIY3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Scn10aQ6QIY3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Scn10aQ6QIY3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Scn10aQ6QIY3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
Scn10aQ6QIY3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Scn10aQ6QIY3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Scn10aQ6QIY3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Scn10aQ6QIY3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Scn10aQ6QIY3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.11■■■□□ 2.57
Scn10aQ6QIY3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Scn10aQ6QIY3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Scn10aQ6QIY3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.09■■■□□ 2.57
Scn10aQ6QIY3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Scn10aQ6QIY3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Scn10aQ6QIY3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.05■■■□□ 2.56
Scn10aQ6QIY3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Scn10aQ6QIY3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Scn10aQ6QIY3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Scn10aQ6QIY3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Scn10aQ6QIY3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
Scn10aQ6QIY3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Scn10aQ6QIY3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Scn10aQ6QIY3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
Scn10aQ6QIY3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.96■■■□□ 2.55
Scn10aQ6QIY3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Scn10aQ6QIY3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC30.95■■■□□ 2.55
Scn10aQ6QIY3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.94■■■□□ 2.54
Scn10aQ6QIY3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Scn10aQ6QIY3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Scn10aQ6QIY3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Scn10aQ6QIY3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Scn10aQ6QIY3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.9■■■□□ 2.54
Scn10aQ6QIY3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC30.88■■■□□ 2.53
Scn10aQ6QIY3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Scn10aQ6QIY3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Scn10aQ6QIY3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Scn10aQ6QIY3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Scn10aQ6QIY3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.8■■■□□ 2.52
Scn10aQ6QIY3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.79■■■□□ 2.52
Scn10aQ6QIY3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Scn10aQ6QIY3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Scn10aQ6QIY3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Scn10aQ6QIY3 Gm24970-201ENSMUST00000175582 82 ntBASIC30.76■■■□□ 2.51
Scn10aQ6QIY3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Scn10aQ6QIY3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Scn10aQ6QIY3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Scn10aQ6QIY3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.72■■■□□ 2.51
Scn10aQ6QIY3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.71■■■□□ 2.51
Scn10aQ6QIY3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Scn10aQ6QIY3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Scn10aQ6QIY3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.69■■■□□ 2.5
Scn10aQ6QIY3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Scn10aQ6QIY3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Scn10aQ6QIY3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Scn10aQ6QIY3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Scn10aQ6QIY3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Scn10aQ6QIY3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.64■■■□□ 2.5
Scn10aQ6QIY3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.63■■■□□ 2.49
Scn10aQ6QIY3 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.62■■■□□ 2.49
Scn10aQ6QIY3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.62■■■□□ 2.49
Scn10aQ6QIY3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Scn10aQ6QIY3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
Scn10aQ6QIY3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Scn10aQ6QIY3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
Scn10aQ6QIY3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Scn10aQ6QIY3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Scn10aQ6QIY3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Scn10aQ6QIY3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Scn10aQ6QIY3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Scn10aQ6QIY3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.46■■■□□ 2.47
Scn10aQ6QIY3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Scn10aQ6QIY3 Gm8503-201ENSMUST00000118131 455 ntBASIC30.46■■■□□ 2.47
Scn10aQ6QIY3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
Scn10aQ6QIY3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Scn10aQ6QIY3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Scn10aQ6QIY3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
Scn10aQ6QIY3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Scn10aQ6QIY3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Scn10aQ6QIY3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.42■■■□□ 2.46
Scn10aQ6QIY3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
Scn10aQ6QIY3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
Retrieved 100 of 76,532 protein–RNA pairs in 1243.7 ms