Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC33.17■■■□□ 2.9
Ddx58Q6Q899 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC33.16■■■□□ 2.9
Ddx58Q6Q899 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC33.15■■■□□ 2.9
Ddx58Q6Q899 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Ddx58Q6Q899 Gm16148-201ENSMUST00000119653 893 ntBASIC33.12■■■□□ 2.89
Ddx58Q6Q899 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC33.11■■■□□ 2.89
Ddx58Q6Q899 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Ddx58Q6Q899 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC33.1■■■□□ 2.89
Ddx58Q6Q899 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Ddx58Q6Q899 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
Ddx58Q6Q899 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Ddx58Q6Q899 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Ddx58Q6Q899 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Ddx58Q6Q899 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Ddx58Q6Q899 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Ddx58Q6Q899 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Ddx58Q6Q899 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Ddx58Q6Q899 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
Ddx58Q6Q899 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
Ddx58Q6Q899 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Ddx58Q6Q899 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.96■■■□□ 2.87
Ddx58Q6Q899 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
Ddx58Q6Q899 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
Ddx58Q6Q899 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32.88■■■□□ 2.85
Ddx58Q6Q899 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.86■■■□□ 2.85
Ddx58Q6Q899 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Ddx58Q6Q899 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Ddx58Q6Q899 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC32.82■■■□□ 2.84
Ddx58Q6Q899 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
Ddx58Q6Q899 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Ddx58Q6Q899 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Ddx58Q6Q899 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32.78■■■□□ 2.84
Ddx58Q6Q899 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC32.76■■■□□ 2.83
Ddx58Q6Q899 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Ddx58Q6Q899 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Ddx58Q6Q899 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Ddx58Q6Q899 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Ddx58Q6Q899 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
Ddx58Q6Q899 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32.7■■■□□ 2.83
Ddx58Q6Q899 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC32.67■■■□□ 2.82
Ddx58Q6Q899 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
Ddx58Q6Q899 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC32.67■■■□□ 2.82
Ddx58Q6Q899 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Ddx58Q6Q899 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.63■■■□□ 2.81
Ddx58Q6Q899 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC32.61■■■□□ 2.81
Ddx58Q6Q899 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Ddx58Q6Q899 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.58■■■□□ 2.81
Ddx58Q6Q899 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
Ddx58Q6Q899 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Ddx58Q6Q899 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.53■■■□□ 2.8
Ddx58Q6Q899 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ddx58Q6Q899 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Ddx58Q6Q899 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Ddx58Q6Q899 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC32.49■■■□□ 2.79
Ddx58Q6Q899 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC32.48■■■□□ 2.79
Ddx58Q6Q899 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ddx58Q6Q899 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Ddx58Q6Q899 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Ddx58Q6Q899 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC32.47■■■□□ 2.79
Ddx58Q6Q899 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Ddx58Q6Q899 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC32.44■■■□□ 2.78
Ddx58Q6Q899 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ddx58Q6Q899 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ddx58Q6Q899 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ddx58Q6Q899 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ddx58Q6Q899 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Ddx58Q6Q899 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Ddx58Q6Q899 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ddx58Q6Q899 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ddx58Q6Q899 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Ddx58Q6Q899 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Ddx58Q6Q899 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ddx58Q6Q899 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ddx58Q6Q899 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Ddx58Q6Q899 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC32.31■■■□□ 2.76
Ddx58Q6Q899 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Ddx58Q6Q899 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC32.3■■■□□ 2.76
Ddx58Q6Q899 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC32.29■■■□□ 2.76
Ddx58Q6Q899 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Ddx58Q6Q899 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Ddx58Q6Q899 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Ddx58Q6Q899 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Ddx58Q6Q899 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ddx58Q6Q899 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ddx58Q6Q899 Gm45855-201ENSMUST00000212546 880 ntBASIC32.23■■■□□ 2.75
Ddx58Q6Q899 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC32.21■■■□□ 2.75
Ddx58Q6Q899 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
Ddx58Q6Q899 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC32.21■■■□□ 2.75
Ddx58Q6Q899 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
Ddx58Q6Q899 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Ddx58Q6Q899 Gm2415-204ENSMUST00000190235 2004 ntBASIC32.19■■■□□ 2.74
Ddx58Q6Q899 Gm9397-201ENSMUST00000200125 605 ntBASIC32.18■■■□□ 2.74
Ddx58Q6Q899 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
Ddx58Q6Q899 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC32.12■■■□□ 2.73
Ddx58Q6Q899 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC32.11■■■□□ 2.73
Ddx58Q6Q899 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ddx58Q6Q899 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ddx58Q6Q899 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ddx58Q6Q899 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC32.09■■■□□ 2.73
Ddx58Q6Q899 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms