Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.52■■■□□ 2.8
Pdzrn3Q69ZS0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Pdzrn3Q69ZS0 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.45■■■□□ 2.79
Pdzrn3Q69ZS0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Pdzrn3Q69ZS0 Peli2-204ENSMUST00000226513 1320 ntBASIC32.45■■■□□ 2.78
Pdzrn3Q69ZS0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
Pdzrn3Q69ZS0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
Pdzrn3Q69ZS0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Pdzrn3Q69ZS0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Pdzrn3Q69ZS0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Pdzrn3Q69ZS0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Pdzrn3Q69ZS0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Pdzrn3Q69ZS0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.41■■■□□ 2.78
Pdzrn3Q69ZS0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC32.4■■■□□ 2.78
Pdzrn3Q69ZS0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
Pdzrn3Q69ZS0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Pdzrn3Q69ZS0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Pdzrn3Q69ZS0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Pdzrn3Q69ZS0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Pdzrn3Q69ZS0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Pdzrn3Q69ZS0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Pdzrn3Q69ZS0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Pdzrn3Q69ZS0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.33■■■□□ 2.77
Pdzrn3Q69ZS0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32.32■■■□□ 2.76
Pdzrn3Q69ZS0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
Pdzrn3Q69ZS0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
Pdzrn3Q69ZS0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC32.26■■■□□ 2.75
Pdzrn3Q69ZS0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Pdzrn3Q69ZS0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Pdzrn3Q69ZS0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.25■■■□□ 2.75
Pdzrn3Q69ZS0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC32.23■■■□□ 2.75
Pdzrn3Q69ZS0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Pdzrn3Q69ZS0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Pdzrn3Q69ZS0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Pdzrn3Q69ZS0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC32.13■■■□□ 2.73
Pdzrn3Q69ZS0 Mipep-204ENSMUST00000225043 1548 ntBASIC32.13■■■□□ 2.73
Pdzrn3Q69ZS0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Pdzrn3Q69ZS0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Pdzrn3Q69ZS0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Pdzrn3Q69ZS0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Pdzrn3Q69ZS0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Pdzrn3Q69ZS0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC32.1■■■□□ 2.73
Pdzrn3Q69ZS0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
Pdzrn3Q69ZS0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Pdzrn3Q69ZS0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Pdzrn3Q69ZS0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Pdzrn3Q69ZS0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.71
Pdzrn3Q69ZS0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.71
Pdzrn3Q69ZS0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC32■■■□□ 2.71
Pdzrn3Q69ZS0 Gm45855-201ENSMUST00000212546 880 ntBASIC32■■■□□ 2.71
Pdzrn3Q69ZS0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
Pdzrn3Q69ZS0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.99■■■□□ 2.71
Pdzrn3Q69ZS0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Pdzrn3Q69ZS0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Pdzrn3Q69ZS0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Pdzrn3Q69ZS0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Pdzrn3Q69ZS0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
Pdzrn3Q69ZS0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Pdzrn3Q69ZS0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Pdzrn3Q69ZS0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.87■■■□□ 2.69
Pdzrn3Q69ZS0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
Pdzrn3Q69ZS0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Pdzrn3Q69ZS0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
Pdzrn3Q69ZS0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pdzrn3Q69ZS0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Pdzrn3Q69ZS0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Pdzrn3Q69ZS0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pdzrn3Q69ZS0 Gm9397-201ENSMUST00000200125 605 ntBASIC31.77■■■□□ 2.68
Pdzrn3Q69ZS0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Pdzrn3Q69ZS0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.67
Pdzrn3Q69ZS0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Pdzrn3Q69ZS0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Pdzrn3Q69ZS0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Pdzrn3Q69ZS0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.7■■■□□ 2.67
Pdzrn3Q69ZS0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Pdzrn3Q69ZS0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
Pdzrn3Q69ZS0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Pdzrn3Q69ZS0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.67■■■□□ 2.66
Pdzrn3Q69ZS0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Pdzrn3Q69ZS0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.65■■■□□ 2.66
Pdzrn3Q69ZS0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Pdzrn3Q69ZS0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Pdzrn3Q69ZS0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Pdzrn3Q69ZS0 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.61■■■□□ 2.65
Pdzrn3Q69ZS0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
Pdzrn3Q69ZS0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.61■■■□□ 2.65
Pdzrn3Q69ZS0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Pdzrn3Q69ZS0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Pdzrn3Q69ZS0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Pdzrn3Q69ZS0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.59■■■□□ 2.65
Pdzrn3Q69ZS0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Pdzrn3Q69ZS0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pdzrn3Q69ZS0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pdzrn3Q69ZS0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
Pdzrn3Q69ZS0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pdzrn3Q69ZS0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Pdzrn3Q69ZS0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Pdzrn3Q69ZS0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Pdzrn3Q69ZS0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Pdzrn3Q69ZS0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.54■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms