Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.52■■■□□ 2.8
Pdzrn3Q69ZS0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Pdzrn3Q69ZS0 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.45■■■□□ 2.79
Pdzrn3Q69ZS0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Pdzrn3Q69ZS0 Peli2-204ENSMUST00000226513 1320 ntBASIC32.45■■■□□ 2.78
Pdzrn3Q69ZS0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
Pdzrn3Q69ZS0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
Pdzrn3Q69ZS0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Pdzrn3Q69ZS0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Pdzrn3Q69ZS0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Pdzrn3Q69ZS0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Pdzrn3Q69ZS0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Pdzrn3Q69ZS0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.41■■■□□ 2.78
Pdzrn3Q69ZS0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC32.4■■■□□ 2.78
Pdzrn3Q69ZS0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
Pdzrn3Q69ZS0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
Pdzrn3Q69ZS0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Pdzrn3Q69ZS0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Pdzrn3Q69ZS0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Pdzrn3Q69ZS0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Pdzrn3Q69ZS0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Pdzrn3Q69ZS0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Pdzrn3Q69ZS0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.33■■■□□ 2.77
Pdzrn3Q69ZS0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC32.32■■■□□ 2.76
Pdzrn3Q69ZS0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
Pdzrn3Q69ZS0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
Pdzrn3Q69ZS0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC32.26■■■□□ 2.75
Pdzrn3Q69ZS0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Pdzrn3Q69ZS0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Pdzrn3Q69ZS0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.25■■■□□ 2.75
Pdzrn3Q69ZS0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC32.23■■■□□ 2.75
Pdzrn3Q69ZS0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Pdzrn3Q69ZS0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Pdzrn3Q69ZS0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Pdzrn3Q69ZS0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC32.13■■■□□ 2.73
Pdzrn3Q69ZS0 Mipep-204ENSMUST00000225043 1548 ntBASIC32.13■■■□□ 2.73
Pdzrn3Q69ZS0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Pdzrn3Q69ZS0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Pdzrn3Q69ZS0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Pdzrn3Q69ZS0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Pdzrn3Q69ZS0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Pdzrn3Q69ZS0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC32.1■■■□□ 2.73
Pdzrn3Q69ZS0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
Pdzrn3Q69ZS0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Pdzrn3Q69ZS0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Pdzrn3Q69ZS0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Pdzrn3Q69ZS0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.71
Pdzrn3Q69ZS0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.71
Pdzrn3Q69ZS0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC32■■■□□ 2.71
Pdzrn3Q69ZS0 Gm45855-201ENSMUST00000212546 880 ntBASIC32■■■□□ 2.71
Pdzrn3Q69ZS0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
Pdzrn3Q69ZS0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.99■■■□□ 2.71
Pdzrn3Q69ZS0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Pdzrn3Q69ZS0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Pdzrn3Q69ZS0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Pdzrn3Q69ZS0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Pdzrn3Q69ZS0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
Pdzrn3Q69ZS0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Pdzrn3Q69ZS0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Pdzrn3Q69ZS0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.87■■■□□ 2.69
Pdzrn3Q69ZS0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
Pdzrn3Q69ZS0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Pdzrn3Q69ZS0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
Pdzrn3Q69ZS0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pdzrn3Q69ZS0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Pdzrn3Q69ZS0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Pdzrn3Q69ZS0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Pdzrn3Q69ZS0 Gm9397-201ENSMUST00000200125 605 ntBASIC31.77■■■□□ 2.68
Pdzrn3Q69ZS0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Pdzrn3Q69ZS0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.67
Pdzrn3Q69ZS0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Pdzrn3Q69ZS0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Pdzrn3Q69ZS0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Pdzrn3Q69ZS0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.7■■■□□ 2.67
Pdzrn3Q69ZS0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Pdzrn3Q69ZS0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
Pdzrn3Q69ZS0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Pdzrn3Q69ZS0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.67■■■□□ 2.66
Pdzrn3Q69ZS0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Pdzrn3Q69ZS0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.65■■■□□ 2.66
Pdzrn3Q69ZS0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Pdzrn3Q69ZS0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Pdzrn3Q69ZS0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Pdzrn3Q69ZS0 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.61■■■□□ 2.65
Pdzrn3Q69ZS0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
Pdzrn3Q69ZS0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.61■■■□□ 2.65
Pdzrn3Q69ZS0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Pdzrn3Q69ZS0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Pdzrn3Q69ZS0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Pdzrn3Q69ZS0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.59■■■□□ 2.65
Pdzrn3Q69ZS0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Pdzrn3Q69ZS0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pdzrn3Q69ZS0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pdzrn3Q69ZS0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
Pdzrn3Q69ZS0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Pdzrn3Q69ZS0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Pdzrn3Q69ZS0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Pdzrn3Q69ZS0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Pdzrn3Q69ZS0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Pdzrn3Q69ZS0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.54■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms