Protein–RNA interactions for Protein: Q64705

Usf2, Upstream stimulatory factor 2, mousemouse

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf2Q64705 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Usf2Q64705 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usf2Q64705 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Usf2Q64705 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usf2Q64705 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Usf2Q64705 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Usf2Q64705 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Usf2Q64705 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Usf2Q64705 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.53■■□□□ 1.04
Usf2Q64705 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Usf2Q64705 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Usf2Q64705 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Usf2Q64705 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Usf2Q64705 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Usf2Q64705 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Usf2Q64705 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Usf2Q64705 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Usf2Q64705 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Usf2Q64705 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Usf2Q64705 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Usf2Q64705 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Usf2Q64705 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Usf2Q64705 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Usf2Q64705 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Usf2Q64705 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Usf2Q64705 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.44■■□□□ 1.02
Usf2Q64705 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Usf2Q64705 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Usf2Q64705 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Usf2Q64705 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Usf2Q64705 Gm27322-201ENSMUST00000184007 104 ntBASIC21.41■■□□□ 1.02
Usf2Q64705 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Usf2Q64705 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.4■■□□□ 1.02
Usf2Q64705 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Usf2Q64705 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Usf2Q64705 Gm26115-201ENSMUST00000175605 87 ntBASIC21.38■■□□□ 1.01
Usf2Q64705 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usf2Q64705 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usf2Q64705 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Usf2Q64705 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usf2Q64705 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usf2Q64705 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
Usf2Q64705 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Usf2Q64705 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usf2Q64705 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usf2Q64705 Mipep-204ENSMUST00000225043 1548 ntBASIC21.31■■□□□ 1
Usf2Q64705 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usf2Q64705 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.31■■□□□ 1
Usf2Q64705 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usf2Q64705 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.3■■□□□ 1
Usf2Q64705 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.3■■□□□ 1
Usf2Q64705 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usf2Q64705 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Usf2Q64705 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Usf2Q64705 Gm8109-201ENSMUST00000194076 746 ntBASIC21.29■■□□□ 1
Usf2Q64705 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Usf2Q64705 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Usf2Q64705 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Usf2Q64705 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Usf2Q64705 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Usf2Q64705 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Usf2Q64705 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usf2Q64705 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Usf2Q64705 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Usf2Q64705 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.23■□□□□ 0.99
Usf2Q64705 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.23■□□□□ 0.99
Usf2Q64705 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Usf2Q64705 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Usf2Q64705 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Usf2Q64705 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.2■□□□□ 0.98
Usf2Q64705 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usf2Q64705 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Usf2Q64705 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usf2Q64705 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.18■□□□□ 0.98
Usf2Q64705 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Usf2Q64705 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usf2Q64705 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usf2Q64705 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usf2Q64705 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.16■□□□□ 0.98
Usf2Q64705 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.14■□□□□ 0.97
Usf2Q64705 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usf2Q64705 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Usf2Q64705 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Usf2Q64705 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Usf2Q64705 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usf2Q64705 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usf2Q64705 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usf2Q64705 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usf2Q64705 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usf2Q64705 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usf2Q64705 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usf2Q64705 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usf2Q64705 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usf2Q64705 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.03■□□□□ 0.96
Usf2Q64705 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usf2Q64705 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Usf2Q64705 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usf2Q64705 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Usf2Q64705 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.01■□□□□ 0.95
Usf2Q64705 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms