Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox16Q62247 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox16Q62247 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox16Q62247 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox16Q62247 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox16Q62247 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sox16Q62247 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox16Q62247 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox16Q62247 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox16Q62247 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox16Q62247 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sox16Q62247 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox16Q62247 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox16Q62247 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC15.15■□□□□ 0.02
Sox16Q62247 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox16Q62247 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox16Q62247 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sox16Q62247 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox16Q62247 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sox16Q62247 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Sox16Q62247 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox16Q62247 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox16Q62247 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.11■□□□□ 0.01
Sox16Q62247 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox16Q62247 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Sox16Q62247 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox16Q62247 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox16Q62247 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox16Q62247 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox16Q62247 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox16Q62247 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox16Q62247 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox16Q62247 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Sox16Q62247 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox16Q62247 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox16Q62247 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Sox16Q62247 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sox16Q62247 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox16Q62247 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox16Q62247 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15□□□□□ -0.01
Sox16Q62247 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Sox16Q62247 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox16Q62247 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox16Q62247 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sox16Q62247 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox16Q62247 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox16Q62247 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox16Q62247 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox16Q62247 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox16Q62247 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox16Q62247 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox16Q62247 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox16Q62247 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox16Q62247 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox16Q62247 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox16Q62247 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox16Q62247 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox16Q62247 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Sox16Q62247 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Sox16Q62247 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox16Q62247 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox16Q62247 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Sox16Q62247 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Sox16Q62247 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox16Q62247 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox16Q62247 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox16Q62247 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox16Q62247 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Sox16Q62247 Gm9905-201ENSMUST00000065740 1845 ntBASIC14.91□□□□□ -0.02
Sox16Q62247 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox16Q62247 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox16Q62247 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox16Q62247 Gm10524-201ENSMUST00000181931 1893 ntBASIC14.86□□□□□ -0.03
Sox16Q62247 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Sox16Q62247 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC14.85□□□□□ -0.03
Sox16Q62247 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sox16Q62247 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox16Q62247 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox16Q62247 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox16Q62247 AC153890.1-201ENSMUST00000220021 2469 ntBASIC14.84□□□□□ -0.03
Sox16Q62247 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox16Q62247 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sox16Q62247 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox16Q62247 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox16Q62247 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox16Q62247 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox16Q62247 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Sox16Q62247 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sox16Q62247 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox16Q62247 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox16Q62247 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox16Q62247 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox16Q62247 Gm20634-201ENSMUST00000090779 2956 ntBASIC14.79□□□□□ -0.04
Sox16Q62247 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sox16Q62247 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox16Q62247 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox16Q62247 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox16Q62247 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox16Q62247 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox16Q62247 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms