Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
VcanQ62059 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
VcanQ62059 Gm9397-201ENSMUST00000200125 605 ntBASIC25.98■■□□□ 1.75
VcanQ62059 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
VcanQ62059 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
VcanQ62059 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.96■■□□□ 1.75
VcanQ62059 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
VcanQ62059 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
VcanQ62059 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.95■■□□□ 1.74
VcanQ62059 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
VcanQ62059 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
VcanQ62059 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
VcanQ62059 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.89■■□□□ 1.74
VcanQ62059 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
VcanQ62059 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
VcanQ62059 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
VcanQ62059 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VcanQ62059 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
VcanQ62059 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.82■■□□□ 1.72
VcanQ62059 Gm8503-201ENSMUST00000118131 455 ntBASIC25.81■■□□□ 1.72
VcanQ62059 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.72
VcanQ62059 Peli2-204ENSMUST00000226513 1320 ntBASIC25.81■■□□□ 1.72
VcanQ62059 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.81■■□□□ 1.72
VcanQ62059 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
VcanQ62059 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.8■■□□□ 1.72
VcanQ62059 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VcanQ62059 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
VcanQ62059 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
VcanQ62059 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.74■■□□□ 1.71
VcanQ62059 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
VcanQ62059 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.72■■□□□ 1.71
VcanQ62059 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
VcanQ62059 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
VcanQ62059 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
VcanQ62059 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
VcanQ62059 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
VcanQ62059 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
VcanQ62059 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.66■■□□□ 1.7
VcanQ62059 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VcanQ62059 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.64■■□□□ 1.69
VcanQ62059 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.63■■□□□ 1.69
VcanQ62059 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.62■■□□□ 1.69
VcanQ62059 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.62■■□□□ 1.69
VcanQ62059 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
VcanQ62059 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
VcanQ62059 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
VcanQ62059 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
VcanQ62059 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VcanQ62059 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.54■■□□□ 1.68
VcanQ62059 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
VcanQ62059 Gm24970-201ENSMUST00000175582 82 ntBASIC25.53■■□□□ 1.68
VcanQ62059 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
VcanQ62059 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VcanQ62059 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
VcanQ62059 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
VcanQ62059 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.44■■□□□ 1.66
VcanQ62059 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
VcanQ62059 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VcanQ62059 Gm6821-201ENSMUST00000107540 542 ntBASIC25.4■■□□□ 1.66
VcanQ62059 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.38■■□□□ 1.65
VcanQ62059 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VcanQ62059 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
VcanQ62059 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.36■■□□□ 1.65
VcanQ62059 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
VcanQ62059 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
VcanQ62059 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.31■■□□□ 1.64
VcanQ62059 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
VcanQ62059 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
VcanQ62059 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
VcanQ62059 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
VcanQ62059 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
VcanQ62059 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.19■■□□□ 1.62
VcanQ62059 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
VcanQ62059 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
VcanQ62059 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.18■■□□□ 1.62
VcanQ62059 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.18■■□□□ 1.62
VcanQ62059 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.16■■□□□ 1.62
VcanQ62059 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
VcanQ62059 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
VcanQ62059 Mir6538-201ENSMUST00000183713 110 ntBASIC25.14■■□□□ 1.62
VcanQ62059 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.13■■□□□ 1.61
VcanQ62059 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
VcanQ62059 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
VcanQ62059 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
VcanQ62059 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
VcanQ62059 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.06■■□□□ 1.6
VcanQ62059 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.06■■□□□ 1.6
VcanQ62059 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
VcanQ62059 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
VcanQ62059 Gm15039-201ENSMUST00000118914 875 ntBASIC25.04■■□□□ 1.6
VcanQ62059 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
VcanQ62059 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.02■■□□□ 1.6
VcanQ62059 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
VcanQ62059 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
VcanQ62059 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25■■□□□ 1.59
VcanQ62059 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
VcanQ62059 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
VcanQ62059 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
VcanQ62059 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
VcanQ62059 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms