Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Six4Q61321 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Six4Q61321 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
Six4Q61321 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.77■■□□□ 1.88
Six4Q61321 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
Six4Q61321 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
Six4Q61321 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Six4Q61321 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Six4Q61321 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.72■■□□□ 1.87
Six4Q61321 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Six4Q61321 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Six4Q61321 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Six4Q61321 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Six4Q61321 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Six4Q61321 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
Six4Q61321 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Six4Q61321 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Six4Q61321 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Six4Q61321 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Six4Q61321 Gm24804-201ENSMUST00000174982 85 ntBASIC26.58■■□□□ 1.85
Six4Q61321 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Six4Q61321 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Six4Q61321 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Six4Q61321 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Six4Q61321 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Six4Q61321 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.54■■□□□ 1.84
Six4Q61321 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Six4Q61321 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Six4Q61321 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Six4Q61321 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.47■■□□□ 1.83
Six4Q61321 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
Six4Q61321 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Six4Q61321 Peli2-204ENSMUST00000226513 1320 ntBASIC26.45■■□□□ 1.83
Six4Q61321 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Six4Q61321 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Six4Q61321 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Six4Q61321 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Six4Q61321 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Six4Q61321 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Six4Q61321 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Six4Q61321 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.38■■□□□ 1.81
Six4Q61321 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
Six4Q61321 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.37■■□□□ 1.81
Six4Q61321 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Six4Q61321 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Six4Q61321 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.34■■□□□ 1.81
Six4Q61321 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Six4Q61321 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Six4Q61321 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Six4Q61321 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Six4Q61321 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Six4Q61321 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Six4Q61321 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Six4Q61321 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Six4Q61321 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.26■■□□□ 1.79
Six4Q61321 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Six4Q61321 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Six4Q61321 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Six4Q61321 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Six4Q61321 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Six4Q61321 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Six4Q61321 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
Six4Q61321 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Six4Q61321 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Six4Q61321 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Six4Q61321 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Six4Q61321 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Six4Q61321 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Six4Q61321 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Six4Q61321 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.15■■□□□ 1.78
Six4Q61321 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Six4Q61321 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Six4Q61321 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.1■■□□□ 1.77
Six4Q61321 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Six4Q61321 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Six4Q61321 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Six4Q61321 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Six4Q61321 Gm16148-201ENSMUST00000119653 893 ntBASIC26.06■■□□□ 1.76
Six4Q61321 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Six4Q61321 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Six4Q61321 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Six4Q61321 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.05■■□□□ 1.76
Six4Q61321 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
Six4Q61321 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.04■■□□□ 1.76
Six4Q61321 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Six4Q61321 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Six4Q61321 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.02■■□□□ 1.76
Six4Q61321 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Six4Q61321 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Six4Q61321 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Six4Q61321 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Six4Q61321 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Six4Q61321 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Six4Q61321 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.99■■□□□ 1.75
Six4Q61321 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Six4Q61321 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
Six4Q61321 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.97■■□□□ 1.75
Six4Q61321 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Six4Q61321 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Six4Q61321 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms