Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Clns1aQ61189 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Clns1aQ61189 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Clns1aQ61189 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.02■■□□□ 1.12
Clns1aQ61189 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Clns1aQ61189 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Clns1aQ61189 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Clns1aQ61189 Gm25238-201ENSMUST00000174914 89 ntBASIC21.97■■□□□ 1.11
Clns1aQ61189 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Clns1aQ61189 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Clns1aQ61189 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Clns1aQ61189 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Clns1aQ61189 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Clns1aQ61189 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Clns1aQ61189 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.88■■□□□ 1.09
Clns1aQ61189 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Clns1aQ61189 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Clns1aQ61189 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Clns1aQ61189 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Clns1aQ61189 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Clns1aQ61189 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Clns1aQ61189 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Clns1aQ61189 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Clns1aQ61189 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Clns1aQ61189 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Clns1aQ61189 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Clns1aQ61189 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Clns1aQ61189 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Clns1aQ61189 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Clns1aQ61189 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Clns1aQ61189 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Clns1aQ61189 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clns1aQ61189 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.77■■□□□ 1.08
Clns1aQ61189 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Clns1aQ61189 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Clns1aQ61189 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Clns1aQ61189 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.76■■□□□ 1.07
Clns1aQ61189 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clns1aQ61189 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clns1aQ61189 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.75■■□□□ 1.07
Clns1aQ61189 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clns1aQ61189 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
Clns1aQ61189 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Clns1aQ61189 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Clns1aQ61189 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clns1aQ61189 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clns1aQ61189 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.72■■□□□ 1.07
Clns1aQ61189 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Clns1aQ61189 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clns1aQ61189 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clns1aQ61189 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clns1aQ61189 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.7■■□□□ 1.06
Clns1aQ61189 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clns1aQ61189 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clns1aQ61189 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clns1aQ61189 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clns1aQ61189 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.67■■□□□ 1.06
Clns1aQ61189 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clns1aQ61189 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clns1aQ61189 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clns1aQ61189 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Clns1aQ61189 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Clns1aQ61189 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Clns1aQ61189 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clns1aQ61189 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Clns1aQ61189 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clns1aQ61189 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Clns1aQ61189 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clns1aQ61189 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Clns1aQ61189 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Clns1aQ61189 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Clns1aQ61189 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clns1aQ61189 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clns1aQ61189 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.59■■□□□ 1.05
Clns1aQ61189 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clns1aQ61189 Rab21-202ENSMUST00000218831 843 ntBASIC21.59■■□□□ 1.05
Clns1aQ61189 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Clns1aQ61189 Mipep-204ENSMUST00000225043 1548 ntBASIC21.57■■□□□ 1.04
Clns1aQ61189 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Clns1aQ61189 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Clns1aQ61189 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Clns1aQ61189 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Clns1aQ61189 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Clns1aQ61189 Amer2-203ENSMUST00000225247 2662 ntBASIC21.54■■□□□ 1.04
Clns1aQ61189 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clns1aQ61189 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Clns1aQ61189 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Clns1aQ61189 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Clns1aQ61189 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.5■■□□□ 1.03
Clns1aQ61189 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Clns1aQ61189 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Clns1aQ61189 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Clns1aQ61189 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Clns1aQ61189 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Clns1aQ61189 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Clns1aQ61189 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Clns1aQ61189 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Clns1aQ61189 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Clns1aQ61189 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Clns1aQ61189 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms