Protein–RNA interactions for Protein: Q5M8Q2

H2al1a, Histone H2A-like 1, mousemouse

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al1aQ5M8Q2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2al1aQ5M8Q2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
H2al1aQ5M8Q2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2al1aQ5M8Q2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2al1aQ5M8Q2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
H2al1aQ5M8Q2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
H2al1aQ5M8Q2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2al1aQ5M8Q2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2al1aQ5M8Q2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2al1aQ5M8Q2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
H2al1aQ5M8Q2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
H2al1aQ5M8Q2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
H2al1aQ5M8Q2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC15.77■□□□□ 0.12
H2al1aQ5M8Q2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H2al1aQ5M8Q2 Gm9905-201ENSMUST00000065740 1845 ntBASIC15.77■□□□□ 0.11
H2al1aQ5M8Q2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
H2al1aQ5M8Q2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
H2al1aQ5M8Q2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
H2al1aQ5M8Q2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
H2al1aQ5M8Q2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.73■□□□□ 0.11
H2al1aQ5M8Q2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
H2al1aQ5M8Q2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
H2al1aQ5M8Q2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
H2al1aQ5M8Q2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC15.69■□□□□ 0.1
H2al1aQ5M8Q2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
H2al1aQ5M8Q2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
H2al1aQ5M8Q2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2al1aQ5M8Q2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2al1aQ5M8Q2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
H2al1aQ5M8Q2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2al1aQ5M8Q2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2al1aQ5M8Q2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
H2al1aQ5M8Q2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2al1aQ5M8Q2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2al1aQ5M8Q2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2al1aQ5M8Q2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
H2al1aQ5M8Q2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2al1aQ5M8Q2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
H2al1aQ5M8Q2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2al1aQ5M8Q2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2al1aQ5M8Q2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2al1aQ5M8Q2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2al1aQ5M8Q2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2al1aQ5M8Q2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H2al1aQ5M8Q2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2al1aQ5M8Q2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H2al1aQ5M8Q2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
H2al1aQ5M8Q2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
H2al1aQ5M8Q2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
H2al1aQ5M8Q2 Gm10524-201ENSMUST00000181931 1893 ntBASIC15.57■□□□□ 0.08
H2al1aQ5M8Q2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
H2al1aQ5M8Q2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
H2al1aQ5M8Q2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
H2al1aQ5M8Q2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2al1aQ5M8Q2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
H2al1aQ5M8Q2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
H2al1aQ5M8Q2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2al1aQ5M8Q2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2al1aQ5M8Q2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
H2al1aQ5M8Q2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC15.51■□□□□ 0.07
H2al1aQ5M8Q2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2al1aQ5M8Q2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
H2al1aQ5M8Q2 Gm6206-201ENSMUST00000133472 2199 ntBASIC15.49■□□□□ 0.07
H2al1aQ5M8Q2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
H2al1aQ5M8Q2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
H2al1aQ5M8Q2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
H2al1aQ5M8Q2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
H2al1aQ5M8Q2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2al1aQ5M8Q2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
H2al1aQ5M8Q2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
H2al1aQ5M8Q2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
H2al1aQ5M8Q2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
H2al1aQ5M8Q2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
H2al1aQ5M8Q2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC15.43■□□□□ 0.06
H2al1aQ5M8Q2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
H2al1aQ5M8Q2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2al1aQ5M8Q2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
H2al1aQ5M8Q2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
H2al1aQ5M8Q2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
H2al1aQ5M8Q2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2al1aQ5M8Q2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
H2al1aQ5M8Q2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC15.4■□□□□ 0.06
H2al1aQ5M8Q2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
H2al1aQ5M8Q2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
H2al1aQ5M8Q2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
H2al1aQ5M8Q2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
H2al1aQ5M8Q2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
H2al1aQ5M8Q2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
H2al1aQ5M8Q2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
H2al1aQ5M8Q2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
H2al1aQ5M8Q2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
H2al1aQ5M8Q2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
H2al1aQ5M8Q2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
H2al1aQ5M8Q2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
H2al1aQ5M8Q2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
H2al1aQ5M8Q2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2al1aQ5M8Q2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
H2al1aQ5M8Q2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2al1aQ5M8Q2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2al1aQ5M8Q2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms