Protein–RNA interactions for Protein: Q4VAB4

Cnpy1, Protein canopy homolog 1, mousemouse

Predictions only

Length 94 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnpy1Q4VAB4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cnpy1Q4VAB4 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.2■■□□□ 1.3
Cnpy1Q4VAB4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cnpy1Q4VAB4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cnpy1Q4VAB4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.16■■□□□ 1.3
Cnpy1Q4VAB4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cnpy1Q4VAB4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cnpy1Q4VAB4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Cnpy1Q4VAB4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cnpy1Q4VAB4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cnpy1Q4VAB4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cnpy1Q4VAB4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Cnpy1Q4VAB4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Cnpy1Q4VAB4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Cnpy1Q4VAB4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cnpy1Q4VAB4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cnpy1Q4VAB4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.06■■□□□ 1.28
Cnpy1Q4VAB4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cnpy1Q4VAB4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.03■■□□□ 1.28
Cnpy1Q4VAB4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cnpy1Q4VAB4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cnpy1Q4VAB4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Cnpy1Q4VAB4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cnpy1Q4VAB4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23■■□□□ 1.27
Cnpy1Q4VAB4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Cnpy1Q4VAB4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cnpy1Q4VAB4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Cnpy1Q4VAB4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Cnpy1Q4VAB4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cnpy1Q4VAB4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.97■■□□□ 1.27
Cnpy1Q4VAB4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cnpy1Q4VAB4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cnpy1Q4VAB4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cnpy1Q4VAB4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cnpy1Q4VAB4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
Cnpy1Q4VAB4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.94■■□□□ 1.26
Cnpy1Q4VAB4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cnpy1Q4VAB4 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.93■■□□□ 1.26
Cnpy1Q4VAB4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.93■■□□□ 1.26
Cnpy1Q4VAB4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Cnpy1Q4VAB4 Amer2-203ENSMUST00000225247 2662 ntBASIC22.9■■□□□ 1.26
Cnpy1Q4VAB4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Cnpy1Q4VAB4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Cnpy1Q4VAB4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cnpy1Q4VAB4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Cnpy1Q4VAB4 Gm24109-201ENSMUST00000175489 103 ntBASIC22.88■■□□□ 1.25
Cnpy1Q4VAB4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cnpy1Q4VAB4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cnpy1Q4VAB4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Cnpy1Q4VAB4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cnpy1Q4VAB4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Cnpy1Q4VAB4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
Cnpy1Q4VAB4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cnpy1Q4VAB4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cnpy1Q4VAB4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cnpy1Q4VAB4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cnpy1Q4VAB4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Cnpy1Q4VAB4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cnpy1Q4VAB4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Cnpy1Q4VAB4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.78■■□□□ 1.24
Cnpy1Q4VAB4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cnpy1Q4VAB4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cnpy1Q4VAB4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cnpy1Q4VAB4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Cnpy1Q4VAB4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cnpy1Q4VAB4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.76■■□□□ 1.23
Cnpy1Q4VAB4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cnpy1Q4VAB4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cnpy1Q4VAB4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cnpy1Q4VAB4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cnpy1Q4VAB4 Gm23366-201ENSMUST00000175022 89 ntBASIC22.73■■□□□ 1.23
Cnpy1Q4VAB4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cnpy1Q4VAB4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.72■■□□□ 1.23
Cnpy1Q4VAB4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cnpy1Q4VAB4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.71■■□□□ 1.23
Cnpy1Q4VAB4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Cnpy1Q4VAB4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cnpy1Q4VAB4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cnpy1Q4VAB4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cnpy1Q4VAB4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cnpy1Q4VAB4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cnpy1Q4VAB4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Cnpy1Q4VAB4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Cnpy1Q4VAB4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Cnpy1Q4VAB4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cnpy1Q4VAB4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cnpy1Q4VAB4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cnpy1Q4VAB4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cnpy1Q4VAB4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cnpy1Q4VAB4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cnpy1Q4VAB4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cnpy1Q4VAB4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cnpy1Q4VAB4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cnpy1Q4VAB4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cnpy1Q4VAB4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cnpy1Q4VAB4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.53■■□□□ 1.2
Cnpy1Q4VAB4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cnpy1Q4VAB4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.51■■□□□ 1.19
Cnpy1Q4VAB4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cnpy1Q4VAB4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms