Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smim6Q3U0I6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smim6Q3U0I6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smim6Q3U0I6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smim6Q3U0I6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smim6Q3U0I6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smim6Q3U0I6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Smim6Q3U0I6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smim6Q3U0I6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smim6Q3U0I6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smim6Q3U0I6 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.25■□□□□ 0.83
Smim6Q3U0I6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smim6Q3U0I6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smim6Q3U0I6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smim6Q3U0I6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smim6Q3U0I6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smim6Q3U0I6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.23■□□□□ 0.83
Smim6Q3U0I6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smim6Q3U0I6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smim6Q3U0I6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smim6Q3U0I6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smim6Q3U0I6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Smim6Q3U0I6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim6Q3U0I6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.18■□□□□ 0.82
Smim6Q3U0I6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
Smim6Q3U0I6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smim6Q3U0I6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
Smim6Q3U0I6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smim6Q3U0I6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Smim6Q3U0I6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smim6Q3U0I6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smim6Q3U0I6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Smim6Q3U0I6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smim6Q3U0I6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Smim6Q3U0I6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Smim6Q3U0I6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smim6Q3U0I6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Smim6Q3U0I6 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.08■□□□□ 0.8
Smim6Q3U0I6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smim6Q3U0I6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smim6Q3U0I6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smim6Q3U0I6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smim6Q3U0I6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smim6Q3U0I6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smim6Q3U0I6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smim6Q3U0I6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.98■□□□□ 0.79
Smim6Q3U0I6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smim6Q3U0I6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smim6Q3U0I6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smim6Q3U0I6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Smim6Q3U0I6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smim6Q3U0I6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smim6Q3U0I6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smim6Q3U0I6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Smim6Q3U0I6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Smim6Q3U0I6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smim6Q3U0I6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smim6Q3U0I6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smim6Q3U0I6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smim6Q3U0I6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smim6Q3U0I6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.9■□□□□ 0.78
Smim6Q3U0I6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smim6Q3U0I6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smim6Q3U0I6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smim6Q3U0I6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.87■□□□□ 0.77
Smim6Q3U0I6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Smim6Q3U0I6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smim6Q3U0I6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smim6Q3U0I6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smim6Q3U0I6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smim6Q3U0I6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smim6Q3U0I6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smim6Q3U0I6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smim6Q3U0I6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smim6Q3U0I6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smim6Q3U0I6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Smim6Q3U0I6 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.82■□□□□ 0.76
Smim6Q3U0I6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smim6Q3U0I6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smim6Q3U0I6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Smim6Q3U0I6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.8■□□□□ 0.76
Smim6Q3U0I6 Amer2-203ENSMUST00000225247 2662 ntBASIC19.79■□□□□ 0.76
Smim6Q3U0I6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smim6Q3U0I6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smim6Q3U0I6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smim6Q3U0I6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smim6Q3U0I6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.75■□□□□ 0.75
Smim6Q3U0I6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim6Q3U0I6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim6Q3U0I6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim6Q3U0I6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim6Q3U0I6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim6Q3U0I6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim6Q3U0I6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smim6Q3U0I6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smim6Q3U0I6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.68■□□□□ 0.74
Smim6Q3U0I6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Smim6Q3U0I6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Smim6Q3U0I6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smim6Q3U0I6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms