Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.3■□□□□ 0.68
PrkdcP97313 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PrkdcP97313 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.29■□□□□ 0.68
PrkdcP97313 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.28■□□□□ 0.68
PrkdcP97313 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PrkdcP97313 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PrkdcP97313 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PrkdcP97313 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PrkdcP97313 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PrkdcP97313 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PrkdcP97313 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PrkdcP97313 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
PrkdcP97313 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkdcP97313 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PrkdcP97313 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PrkdcP97313 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.19■□□□□ 0.66
PrkdcP97313 Gm10524-201ENSMUST00000181931 1893 ntBASIC19.19■□□□□ 0.66
PrkdcP97313 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PrkdcP97313 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PrkdcP97313 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.16■□□□□ 0.66
PrkdcP97313 Gm8503-201ENSMUST00000118131 455 ntBASIC19.15■□□□□ 0.66
PrkdcP97313 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PrkdcP97313 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PrkdcP97313 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PrkdcP97313 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.13■□□□□ 0.65
PrkdcP97313 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
PrkdcP97313 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PrkdcP97313 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PrkdcP97313 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.1■□□□□ 0.65
PrkdcP97313 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PrkdcP97313 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.07■□□□□ 0.64
PrkdcP97313 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.07■□□□□ 0.64
PrkdcP97313 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.07■□□□□ 0.64
PrkdcP97313 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PrkdcP97313 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.04■□□□□ 0.64
PrkdcP97313 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PrkdcP97313 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PrkdcP97313 Gm24970-201ENSMUST00000175582 82 ntBASIC18.97■□□□□ 0.63
PrkdcP97313 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PrkdcP97313 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PrkdcP97313 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.95■□□□□ 0.62
PrkdcP97313 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PrkdcP97313 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PrkdcP97313 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.92■□□□□ 0.62
PrkdcP97313 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PrkdcP97313 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PrkdcP97313 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.91■□□□□ 0.62
PrkdcP97313 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PrkdcP97313 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PrkdcP97313 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PrkdcP97313 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.9■□□□□ 0.62
PrkdcP97313 Gm6821-201ENSMUST00000107540 542 ntBASIC18.88■□□□□ 0.61
PrkdcP97313 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PrkdcP97313 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PrkdcP97313 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PrkdcP97313 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PrkdcP97313 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PrkdcP97313 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PrkdcP97313 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PrkdcP97313 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PrkdcP97313 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PrkdcP97313 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.77■□□□□ 0.6
PrkdcP97313 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.76■□□□□ 0.59
PrkdcP97313 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrkdcP97313 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.75■□□□□ 0.59
PrkdcP97313 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.75■□□□□ 0.59
PrkdcP97313 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PrkdcP97313 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PrkdcP97313 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PrkdcP97313 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PrkdcP97313 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PrkdcP97313 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PrkdcP97313 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PrkdcP97313 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PrkdcP97313 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PrkdcP97313 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.66■□□□□ 0.58
PrkdcP97313 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PrkdcP97313 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PrkdcP97313 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PrkdcP97313 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PrkdcP97313 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.6■□□□□ 0.57
PrkdcP97313 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.58■□□□□ 0.56
PrkdcP97313 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PrkdcP97313 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PrkdcP97313 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PrkdcP97313 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PrkdcP97313 Mipep-204ENSMUST00000225043 1548 ntBASIC18.56■□□□□ 0.56
PrkdcP97313 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
PrkdcP97313 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PrkdcP97313 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.55■□□□□ 0.56
PrkdcP97313 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PrkdcP97313 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.54■□□□□ 0.56
PrkdcP97313 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PrkdcP97313 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PrkdcP97313 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.53■□□□□ 0.56
PrkdcP97313 Gm11175-201ENSMUST00000116172 543 ntBASIC18.52■□□□□ 0.56
PrkdcP97313 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.52■□□□□ 0.56
PrkdcP97313 Mir6538-201ENSMUST00000183713 110 ntBASIC18.52■□□□□ 0.55
PrkdcP97313 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PrkdcP97313 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms