Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Xcl1P47993 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Xcl1P47993 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Xcl1P47993 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Xcl1P47993 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Xcl1P47993 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.05■□□□□ 0.32
Xcl1P47993 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Xcl1P47993 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Xcl1P47993 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Xcl1P47993 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Xcl1P47993 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.03■□□□□ 0.32
Xcl1P47993 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Xcl1P47993 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Xcl1P47993 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Xcl1P47993 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Xcl1P47993 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC16.99■□□□□ 0.31
Xcl1P47993 Gm15045-201ENSMUST00000117359 883 ntBASIC16.99■□□□□ 0.31
Xcl1P47993 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Xcl1P47993 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Xcl1P47993 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Xcl1P47993 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Xcl1P47993 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Xcl1P47993 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Xcl1P47993 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Xcl1P47993 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Xcl1P47993 Gm6658-202ENSMUST00000209493 1885 ntBASIC16.94■□□□□ 0.3
Xcl1P47993 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Xcl1P47993 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Xcl1P47993 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Xcl1P47993 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Xcl1P47993 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Xcl1P47993 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Xcl1P47993 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Xcl1P47993 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Xcl1P47993 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC16.91■□□□□ 0.3
Xcl1P47993 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Xcl1P47993 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Xcl1P47993 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
Xcl1P47993 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Xcl1P47993 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Xcl1P47993 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Xcl1P47993 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Xcl1P47993 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Xcl1P47993 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Xcl1P47993 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Xcl1P47993 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Xcl1P47993 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
Xcl1P47993 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Xcl1P47993 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Xcl1P47993 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Xcl1P47993 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
Xcl1P47993 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Xcl1P47993 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Xcl1P47993 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Xcl1P47993 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Xcl1P47993 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Xcl1P47993 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Xcl1P47993 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Xcl1P47993 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Xcl1P47993 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Xcl1P47993 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Xcl1P47993 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Xcl1P47993 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Xcl1P47993 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Xcl1P47993 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Xcl1P47993 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Xcl1P47993 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Xcl1P47993 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xcl1P47993 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xcl1P47993 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Xcl1P47993 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xcl1P47993 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Xcl1P47993 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Xcl1P47993 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Xcl1P47993 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xcl1P47993 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xcl1P47993 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Xcl1P47993 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Xcl1P47993 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Xcl1P47993 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Xcl1P47993 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Xcl1P47993 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Xcl1P47993 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Xcl1P47993 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Xcl1P47993 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Xcl1P47993 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Xcl1P47993 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Xcl1P47993 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Xcl1P47993 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Xcl1P47993 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Xcl1P47993 Gm43445-201ENSMUST00000198564 2091 ntBASIC16.66■□□□□ 0.26
Xcl1P47993 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Xcl1P47993 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Xcl1P47993 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Xcl1P47993 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Xcl1P47993 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Xcl1P47993 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Xcl1P47993 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Xcl1P47993 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Xcl1P47993 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms