Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Timp3P39876 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Timp3P39876 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Timp3P39876 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Timp3P39876 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Timp3P39876 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Timp3P39876 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Timp3P39876 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Timp3P39876 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Timp3P39876 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Timp3P39876 Gm16148-201ENSMUST00000119653 893 ntBASIC21.18■□□□□ 0.98
Timp3P39876 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Timp3P39876 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Timp3P39876 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Timp3P39876 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Timp3P39876 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Timp3P39876 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Timp3P39876 Mipep-204ENSMUST00000225043 1548 ntBASIC21.15■□□□□ 0.98
Timp3P39876 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.15■□□□□ 0.98
Timp3P39876 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Timp3P39876 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Timp3P39876 Peli2-204ENSMUST00000226513 1320 ntBASIC21.12■□□□□ 0.97
Timp3P39876 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Timp3P39876 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Timp3P39876 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Timp3P39876 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Timp3P39876 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Timp3P39876 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.05■□□□□ 0.96
Timp3P39876 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Timp3P39876 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.04■□□□□ 0.96
Timp3P39876 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Timp3P39876 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Timp3P39876 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Timp3P39876 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Timp3P39876 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Timp3P39876 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21■□□□□ 0.95
Timp3P39876 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Timp3P39876 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Timp3P39876 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Timp3P39876 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Timp3P39876 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Timp3P39876 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Timp3P39876 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Timp3P39876 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Timp3P39876 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.92■□□□□ 0.94
Timp3P39876 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.89■□□□□ 0.94
Timp3P39876 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Timp3P39876 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Timp3P39876 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.88■□□□□ 0.93
Timp3P39876 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Timp3P39876 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.87■□□□□ 0.93
Timp3P39876 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Timp3P39876 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Timp3P39876 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Timp3P39876 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Timp3P39876 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.84■□□□□ 0.93
Timp3P39876 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Timp3P39876 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.83■□□□□ 0.92
Timp3P39876 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Timp3P39876 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Timp3P39876 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.81■□□□□ 0.92
Timp3P39876 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Timp3P39876 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Timp3P39876 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Timp3P39876 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Timp3P39876 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Timp3P39876 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Timp3P39876 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Timp3P39876 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Timp3P39876 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.72■□□□□ 0.91
Timp3P39876 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Timp3P39876 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Timp3P39876 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.67■□□□□ 0.9
Timp3P39876 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Timp3P39876 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Timp3P39876 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Timp3P39876 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Timp3P39876 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Timp3P39876 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Timp3P39876 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Timp3P39876 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.63■□□□□ 0.89
Timp3P39876 Zxda-201ENSMUST00000117281 2621 ntBASIC20.62■□□□□ 0.89
Timp3P39876 Gm45855-201ENSMUST00000212546 880 ntBASIC20.61■□□□□ 0.89
Timp3P39876 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Timp3P39876 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.6■□□□□ 0.89
Timp3P39876 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Timp3P39876 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Timp3P39876 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Timp3P39876 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.58■□□□□ 0.89
Timp3P39876 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Timp3P39876 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Timp3P39876 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Timp3P39876 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Timp3P39876 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Timp3P39876 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Timp3P39876 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Timp3P39876 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Timp3P39876 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Timp3P39876 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Timp3P39876 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms