Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
RxrbP28704 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
RxrbP28704 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RxrbP28704 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.4■■□□□ 1.82
RxrbP28704 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RxrbP28704 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RxrbP28704 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RxrbP28704 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
RxrbP28704 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RxrbP28704 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RxrbP28704 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RxrbP28704 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
RxrbP28704 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RxrbP28704 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.32■■□□□ 1.8
RxrbP28704 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.32■■□□□ 1.8
RxrbP28704 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.32■■□□□ 1.8
RxrbP28704 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.31■■□□□ 1.8
RxrbP28704 Rab21-202ENSMUST00000218831 843 ntBASIC26.31■■□□□ 1.8
RxrbP28704 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RxrbP28704 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
RxrbP28704 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RxrbP28704 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RxrbP28704 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RxrbP28704 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RxrbP28704 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RxrbP28704 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.25■■□□□ 1.79
RxrbP28704 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RxrbP28704 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RxrbP28704 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RxrbP28704 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
RxrbP28704 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RxrbP28704 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
RxrbP28704 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RxrbP28704 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RxrbP28704 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RxrbP28704 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RxrbP28704 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
RxrbP28704 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RxrbP28704 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RxrbP28704 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
RxrbP28704 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.13■■□□□ 1.77
RxrbP28704 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
RxrbP28704 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RxrbP28704 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
RxrbP28704 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RxrbP28704 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RxrbP28704 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RxrbP28704 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
RxrbP28704 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.04■■□□□ 1.76
RxrbP28704 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RxrbP28704 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
RxrbP28704 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RxrbP28704 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RxrbP28704 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26■■□□□ 1.75
RxrbP28704 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26■■□□□ 1.75
RxrbP28704 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RxrbP28704 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RxrbP28704 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
RxrbP28704 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RxrbP28704 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.98■■□□□ 1.75
RxrbP28704 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RxrbP28704 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RxrbP28704 Amer2-203ENSMUST00000225247 2662 ntBASIC25.95■■□□□ 1.75
RxrbP28704 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RxrbP28704 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
RxrbP28704 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
RxrbP28704 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
RxrbP28704 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
RxrbP28704 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RxrbP28704 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
RxrbP28704 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RxrbP28704 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
RxrbP28704 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
RxrbP28704 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RxrbP28704 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.86■■□□□ 1.73
RxrbP28704 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
RxrbP28704 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RxrbP28704 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RxrbP28704 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RxrbP28704 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RxrbP28704 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.8■■□□□ 1.72
RxrbP28704 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RxrbP28704 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.79■■□□□ 1.72
RxrbP28704 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
RxrbP28704 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
RxrbP28704 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
RxrbP28704 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
RxrbP28704 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
RxrbP28704 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
RxrbP28704 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.75■■□□□ 1.71
RxrbP28704 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RxrbP28704 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
RxrbP28704 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RxrbP28704 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.71■■□□□ 1.71
RxrbP28704 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RxrbP28704 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RxrbP28704 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.67■■□□□ 1.7
RxrbP28704 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
RxrbP28704 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RxrbP28704 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms