Protein–RNA interactions for Protein: P10400

Pol, Retrovirus-related Pol polyprotein (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PolP10400 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PolP10400 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.47■□□□□ 0.55
PolP10400 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PolP10400 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PolP10400 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PolP10400 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.41■□□□□ 0.54
PolP10400 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.4■□□□□ 0.54
PolP10400 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PolP10400 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PolP10400 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PolP10400 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PolP10400 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PolP10400 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PolP10400 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PolP10400 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PolP10400 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.33■□□□□ 0.52
PolP10400 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PolP10400 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PolP10400 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.32■□□□□ 0.52
PolP10400 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PolP10400 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.31■□□□□ 0.52
PolP10400 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PolP10400 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PolP10400 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PolP10400 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PolP10400 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PolP10400 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PolP10400 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.28■□□□□ 0.52
PolP10400 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PolP10400 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.26■□□□□ 0.51
PolP10400 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PolP10400 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PolP10400 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.24■□□□□ 0.51
PolP10400 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PolP10400 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PolP10400 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PolP10400 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PolP10400 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PolP10400 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.2■□□□□ 0.5
PolP10400 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PolP10400 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PolP10400 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PolP10400 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PolP10400 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
PolP10400 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PolP10400 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PolP10400 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PolP10400 Gm27322-201ENSMUST00000184007 104 ntBASIC18.15■□□□□ 0.5
PolP10400 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PolP10400 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PolP10400 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PolP10400 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PolP10400 Gm26115-201ENSMUST00000175605 87 ntBASIC18.14■□□□□ 0.49
PolP10400 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
PolP10400 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PolP10400 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PolP10400 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PolP10400 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.11■□□□□ 0.49
PolP10400 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.11■□□□□ 0.49
PolP10400 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PolP10400 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PolP10400 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PolP10400 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.1■□□□□ 0.49
PolP10400 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PolP10400 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PolP10400 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PolP10400 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PolP10400 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
PolP10400 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.08■□□□□ 0.49
PolP10400 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PolP10400 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PolP10400 Gm8109-201ENSMUST00000194076 746 ntBASIC18.07■□□□□ 0.48
PolP10400 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PolP10400 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PolP10400 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PolP10400 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PolP10400 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
PolP10400 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
PolP10400 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
PolP10400 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PolP10400 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PolP10400 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PolP10400 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PolP10400 Mipep-204ENSMUST00000225043 1548 ntBASIC18.01■□□□□ 0.47
PolP10400 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PolP10400 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PolP10400 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PolP10400 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PolP10400 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PolP10400 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PolP10400 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PolP10400 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PolP10400 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PolP10400 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PolP10400 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PolP10400 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PolP10400 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PolP10400 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PolP10400 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PolP10400 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms