Protein–RNA interactions for Protein: P0C7A0

Khdc1b, KH homology domain-containing protein 1B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1bP0C7A0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Khdc1bP0C7A0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Khdc1bP0C7A0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Khdc1bP0C7A0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Khdc1bP0C7A0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.24■□□□□ 0.83
Khdc1bP0C7A0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Khdc1bP0C7A0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc1bP0C7A0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc1bP0C7A0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Khdc1bP0C7A0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Khdc1bP0C7A0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Khdc1bP0C7A0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Khdc1bP0C7A0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.16■□□□□ 0.82
Khdc1bP0C7A0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Khdc1bP0C7A0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Khdc1bP0C7A0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Khdc1bP0C7A0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc1bP0C7A0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc1bP0C7A0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Khdc1bP0C7A0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Khdc1bP0C7A0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Khdc1bP0C7A0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Khdc1bP0C7A0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Khdc1bP0C7A0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Khdc1bP0C7A0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Khdc1bP0C7A0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Khdc1bP0C7A0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Khdc1bP0C7A0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Khdc1bP0C7A0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc1bP0C7A0 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.07■□□□□ 0.8
Khdc1bP0C7A0 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.07■□□□□ 0.8
Khdc1bP0C7A0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Khdc1bP0C7A0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Khdc1bP0C7A0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Khdc1bP0C7A0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Khdc1bP0C7A0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Khdc1bP0C7A0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Khdc1bP0C7A0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Khdc1bP0C7A0 Mipep-204ENSMUST00000225043 1548 ntBASIC20.04■□□□□ 0.8
Khdc1bP0C7A0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Khdc1bP0C7A0 Zxda-201ENSMUST00000117281 2621 ntBASIC20.04■□□□□ 0.8
Khdc1bP0C7A0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.03■□□□□ 0.8
Khdc1bP0C7A0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Khdc1bP0C7A0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Khdc1bP0C7A0 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.01■□□□□ 0.79
Khdc1bP0C7A0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Khdc1bP0C7A0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Khdc1bP0C7A0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Khdc1bP0C7A0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Khdc1bP0C7A0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Khdc1bP0C7A0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.97■□□□□ 0.79
Khdc1bP0C7A0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Khdc1bP0C7A0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Khdc1bP0C7A0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Khdc1bP0C7A0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Khdc1bP0C7A0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Khdc1bP0C7A0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Khdc1bP0C7A0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Khdc1bP0C7A0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Khdc1bP0C7A0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Khdc1bP0C7A0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.92■□□□□ 0.78
Khdc1bP0C7A0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Khdc1bP0C7A0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Khdc1bP0C7A0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Khdc1bP0C7A0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Khdc1bP0C7A0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Khdc1bP0C7A0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Khdc1bP0C7A0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Khdc1bP0C7A0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Khdc1bP0C7A0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Khdc1bP0C7A0 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.87■□□□□ 0.77
Khdc1bP0C7A0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
Khdc1bP0C7A0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Khdc1bP0C7A0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Khdc1bP0C7A0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Khdc1bP0C7A0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Khdc1bP0C7A0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Khdc1bP0C7A0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
Khdc1bP0C7A0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Khdc1bP0C7A0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Khdc1bP0C7A0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Khdc1bP0C7A0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Khdc1bP0C7A0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Khdc1bP0C7A0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Khdc1bP0C7A0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Khdc1bP0C7A0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Khdc1bP0C7A0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Khdc1bP0C7A0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Khdc1bP0C7A0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Khdc1bP0C7A0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Khdc1bP0C7A0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Khdc1bP0C7A0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Khdc1bP0C7A0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Khdc1bP0C7A0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Khdc1bP0C7A0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Khdc1bP0C7A0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Khdc1bP0C7A0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Khdc1bP0C7A0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Khdc1bP0C7A0 Amer2-203ENSMUST00000225247 2662 ntBASIC19.72■□□□□ 0.75
Khdc1bP0C7A0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms