Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
NclP09405 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC39.4■■■■□ 3.9
NclP09405 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC39.39■■■■□ 3.9
NclP09405 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC39.38■■■■□ 3.89
NclP09405 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC39.36■■■■□ 3.89
NclP09405 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
NclP09405 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC39.35■■■■□ 3.89
NclP09405 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC39.32■■■■□ 3.88
NclP09405 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
NclP09405 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC39.31■■■■□ 3.88
NclP09405 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
NclP09405 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
NclP09405 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC39.29■■■■□ 3.88
NclP09405 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC39.27■■■■□ 3.88
NclP09405 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC39.26■■■■□ 3.88
NclP09405 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
NclP09405 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC39.23■■■■□ 3.87
NclP09405 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
NclP09405 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
NclP09405 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
NclP09405 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC39.18■■■■□ 3.86
NclP09405 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC39.14■■■■□ 3.86
NclP09405 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
NclP09405 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC39.09■■■■□ 3.85
NclP09405 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC39.08■■■■□ 3.85
NclP09405 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
NclP09405 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC39.07■■■■□ 3.85
NclP09405 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC39.04■■■■□ 3.84
NclP09405 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
NclP09405 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
NclP09405 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC38.97■■■■□ 3.83
NclP09405 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC38.95■■■■□ 3.83
NclP09405 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC38.93■■■■□ 3.82
NclP09405 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC38.91■■■■□ 3.82
NclP09405 Tdp2-203ENSMUST00000223804 1136 ntBASIC38.9■■■■□ 3.82
NclP09405 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC38.88■■■■□ 3.81
NclP09405 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC38.88■■■■□ 3.81
NclP09405 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC38.86■■■■□ 3.81
NclP09405 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
NclP09405 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC38.82■■■■□ 3.8
NclP09405 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC38.82■■■■□ 3.8
NclP09405 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
NclP09405 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC38.79■■■■□ 3.8
NclP09405 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
NclP09405 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
NclP09405 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC38.67■■■■□ 3.78
NclP09405 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
NclP09405 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC38.67■■■■□ 3.78
NclP09405 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
NclP09405 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC38.63■■■■□ 3.78
NclP09405 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC38.63■■■■□ 3.77
NclP09405 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC38.62■■■■□ 3.77
NclP09405 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC38.62■■■■□ 3.77
NclP09405 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC38.62■■■■□ 3.77
NclP09405 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC38.6■■■■□ 3.77
NclP09405 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC38.6■■■■□ 3.77
NclP09405 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
NclP09405 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC38.58■■■■□ 3.77
NclP09405 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC38.57■■■■□ 3.76
NclP09405 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC38.56■■■■□ 3.76
NclP09405 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC38.53■■■■□ 3.76
NclP09405 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC38.52■■■■□ 3.76
NclP09405 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
NclP09405 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC38.47■■■■□ 3.75
NclP09405 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.75
NclP09405 Gm45855-201ENSMUST00000212546 880 ntBASIC38.46■■■■□ 3.75
NclP09405 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
NclP09405 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC38.45■■■■□ 3.75
NclP09405 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC38.45■■■■□ 3.75
NclP09405 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC38.45■■■■□ 3.75
NclP09405 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
NclP09405 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC38.41■■■■□ 3.74
NclP09405 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
NclP09405 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC38.39■■■■□ 3.74
NclP09405 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
NclP09405 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.74
NclP09405 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC38.36■■■■□ 3.73
NclP09405 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
NclP09405 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC38.34■■■■□ 3.73
NclP09405 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC38.33■■■■□ 3.73
NclP09405 Gm9397-201ENSMUST00000200125 605 ntBASIC38.32■■■■□ 3.72
NclP09405 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.72
NclP09405 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC38.29■■■■□ 3.72
NclP09405 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
NclP09405 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC38.29■■■■□ 3.72
NclP09405 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC38.28■■■■□ 3.72
NclP09405 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC38.28■■■■□ 3.72
NclP09405 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC38.28■■■■□ 3.72
NclP09405 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
NclP09405 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC38.24■■■■□ 3.71
NclP09405 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC38.22■■■■□ 3.71
NclP09405 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC38.21■■■■□ 3.71
NclP09405 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC38.21■■■■□ 3.71
NclP09405 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC38.2■■■■□ 3.71
NclP09405 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
NclP09405 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC38.18■■■■□ 3.7
NclP09405 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC38.17■■■■□ 3.7
NclP09405 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC38.17■■■■□ 3.7
NclP09405 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
NclP09405 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms