Protein–RNA interactions for Protein: P09079

Hoxb5, Homeobox protein Hox-B5, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb5P09079 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hoxb5P09079 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.65■■□□□ 1.06
Hoxb5P09079 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Hoxb5P09079 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Hoxb5P09079 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Hoxb5P09079 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hoxb5P09079 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.62■■□□□ 1.05
Hoxb5P09079 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Hoxb5P09079 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hoxb5P09079 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hoxb5P09079 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Hoxb5P09079 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hoxb5P09079 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hoxb5P09079 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Hoxb5P09079 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Hoxb5P09079 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hoxb5P09079 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hoxb5P09079 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hoxb5P09079 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Hoxb5P09079 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxb5P09079 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxb5P09079 Gm25238-201ENSMUST00000174914 89 ntBASIC21.51■■□□□ 1.03
Hoxb5P09079 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxb5P09079 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxb5P09079 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hoxb5P09079 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hoxb5P09079 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxb5P09079 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxb5P09079 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxb5P09079 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Hoxb5P09079 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxb5P09079 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Hoxb5P09079 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxb5P09079 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxb5P09079 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
Hoxb5P09079 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxb5P09079 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxb5P09079 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxb5P09079 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxb5P09079 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.43■■□□□ 1.02
Hoxb5P09079 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hoxb5P09079 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Hoxb5P09079 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Hoxb5P09079 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hoxb5P09079 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.01
Hoxb5P09079 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Hoxb5P09079 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.37■■□□□ 1.01
Hoxb5P09079 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Hoxb5P09079 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxb5P09079 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxb5P09079 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hoxb5P09079 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Hoxb5P09079 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.34■■□□□ 1.01
Hoxb5P09079 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Hoxb5P09079 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Hoxb5P09079 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Hoxb5P09079 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hoxb5P09079 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Hoxb5P09079 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Hoxb5P09079 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.31■■□□□ 1
Hoxb5P09079 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hoxb5P09079 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hoxb5P09079 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.29■■□□□ 1
Hoxb5P09079 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hoxb5P09079 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Hoxb5P09079 Amer2-203ENSMUST00000225247 2662 ntBASIC21.26■□□□□ 0.99
Hoxb5P09079 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hoxb5P09079 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.26■□□□□ 0.99
Hoxb5P09079 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hoxb5P09079 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.24■□□□□ 0.99
Hoxb5P09079 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Hoxb5P09079 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxb5P09079 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxb5P09079 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hoxb5P09079 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hoxb5P09079 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxb5P09079 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.19■□□□□ 0.98
Hoxb5P09079 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hoxb5P09079 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxb5P09079 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hoxb5P09079 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Hoxb5P09079 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hoxb5P09079 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Hoxb5P09079 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxb5P09079 Mipep-204ENSMUST00000225043 1548 ntBASIC21.15■□□□□ 0.98
Hoxb5P09079 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hoxb5P09079 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxb5P09079 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxb5P09079 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxb5P09079 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hoxb5P09079 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hoxb5P09079 Rab21-202ENSMUST00000218831 843 ntBASIC21.12■□□□□ 0.97
Hoxb5P09079 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hoxb5P09079 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Hoxb5P09079 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Hoxb5P09079 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxb5P09079 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hoxb5P09079 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxb5P09079 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hoxb5P09079 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms